Definition | Escherichia coli HS, complete genome. |
---|---|
Accession | NC_009800 |
Length | 4,643,538 |
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The map label for this gene is lplT [H]
Identifier: 157162288
GI number: 157162288
Start: 2990989
End: 2992182
Strand: Reverse
Name: lplT [H]
Synonym: EcHS_A2982
Alternate gene names: 157162288
Gene position: 2992182-2990989 (Counterclockwise)
Preceding gene: 157162289
Following gene: 157162283
Centisome position: 64.44
GC content: 55.53
Gene sequence:
>1194_bases ATGAGTGAGTCAGTGCACACTAACACTTCGTTGTGGTCGAAGGGGATGAAAGCGGTTATCGTGGCGCAGTTTCTCTCTGC GTTTGGCGATAACGCGCTACTGTTTGCCACTCTGGCGTTACTGAAAGCGCAGTTCTATCCGGAGTGGAGCCAGCCCATCC TGCAAATGGTGTTTGTAGGTGCTTACATTCTTTTTGCGCCGTTTGTCGGGCAGGTGGCGGATAGCTTCGCCAAAGGCCGG GTGATGATGTTTGCCAACGGCCTGAAGCTGCTGGGCGCAGCCAGTATCTGCTTTGGTATCAATCCGTTTCTCGGCTATAC GCTGGTGGGTGTTGGTGCTGCAGCCTATTCACCGGCGAAATACGGTATTCTCGGCGAATTAACCACGGGTAGTAAGTTAG TAAAAGCTAACGGTTTAATGGAAGCTTCTACCATAGCGGCGATTTTACTCGGTTCCGTAGCCGGTGGTGTGCTGGCTGAC TGGCATGTACTCGTCGCCCTGGCCGCATGCGCACTGGCCTACGGTGGTGCGGTCGTTGCCAATATCTACATTCCCAAACT GGCGGCGGCGCGTCCGGGGCAGTCCTGGAATCTCATCAACATGACCCGCAGTTTCCTGAATGCCTGCACCTCGCTATGGC GCAATGGTGAAACGCGTTTTTCGCTGGTGGGCACCAGTTTATTCTGGGGAGCGGGTGTCACGCTGCGTTTCCTGTTGGTG CTGTGGGTACCGGTGGCGCTGGGCATTACCGATAACGCTACGCCGACCTATCTCAACGCGATGGTAGCGATTGGTATCGT GGTTGGCGCAGGTGCGGCAGCGAAGCTGGTTACGCTGGAAACCGTGTCACGCTGTATGCCAGCCGGGATTTTGATTGGCG TGGTGGTACTGATTTTCTCCCTGCAACACGAGCTGCTGCCAGCCTATGCCTTGTTGATGCTGATTGGCGTGTTGGGGGGC TTTTTTGTCGTTCCGCTCAATGCGTTGCTACAGGAGCGGGGTAAAAAAAGCGTCGGGGCGGGGAATGCGATTGCAGTACA AAACCTTGGCGAAAACAGCGCCATGTTGTTGATGCTGGGCATTTACTCGCTGGCGGTAATGGTAGGCATCCCGGTCGTGC CCATTGGCATTGGCTTTGGTACGCTGTTTGCGCTGGCAATAACGGCGCTGTGGATCTGGCAGCGCCGTCATTAA
Upstream 100 bases:
>100_bases CCGCGCGATATTCGCTATCTGAAACAGATGCCATTACTTGGCAGCGGCAAACCTGACTTTGTCACGTTGAAAAGCTGGGT AGACGAAGCGGAACAACACG
Downstream 100 bases:
>100_bases TATTTAACGCCGGTTTTAACCGGCGTTAATCTTATGGTGCCGGATAAGTATAAACCTGATGCACAGCTTCAATTTCAGCT AATACGTCTTCGCTTAACTC
Product: lysophospholipid transporter LplT
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 397; Mature: 396
Protein sequence:
>397_residues MSESVHTNTSLWSKGMKAVIVAQFLSAFGDNALLFATLALLKAQFYPEWSQPILQMVFVGAYILFAPFVGQVADSFAKGR VMMFANGLKLLGAASICFGINPFLGYTLVGVGAAAYSPAKYGILGELTTGSKLVKANGLMEASTIAAILLGSVAGGVLAD WHVLVALAACALAYGGAVVANIYIPKLAAARPGQSWNLINMTRSFLNACTSLWRNGETRFSLVGTSLFWGAGVTLRFLLV LWVPVALGITDNATPTYLNAMVAIGIVVGAGAAAKLVTLETVSRCMPAGILIGVVVLIFSLQHELLPAYALLMLIGVLGG FFVVPLNALLQERGKKSVGAGNAIAVQNLGENSAMLLMLGIYSLAVMVGIPVVPIGIGFGTLFALAITALWIWQRRH
Sequences:
>Translated_397_residues MSESVHTNTSLWSKGMKAVIVAQFLSAFGDNALLFATLALLKAQFYPEWSQPILQMVFVGAYILFAPFVGQVADSFAKGR VMMFANGLKLLGAASICFGINPFLGYTLVGVGAAAYSPAKYGILGELTTGSKLVKANGLMEASTIAAILLGSVAGGVLAD WHVLVALAACALAYGGAVVANIYIPKLAAARPGQSWNLINMTRSFLNACTSLWRNGETRFSLVGTSLFWGAGVTLRFLLV LWVPVALGITDNATPTYLNAMVAIGIVVGAGAAAKLVTLETVSRCMPAGILIGVVVLIFSLQHELLPAYALLMLIGVLGG FFVVPLNALLQERGKKSVGAGNAIAVQNLGENSAMLLMLGIYSLAVMVGIPVVPIGIGFGTLFALAITALWIWQRRH >Mature_396_residues SESVHTNTSLWSKGMKAVIVAQFLSAFGDNALLFATLALLKAQFYPEWSQPILQMVFVGAYILFAPFVGQVADSFAKGRV MMFANGLKLLGAASICFGINPFLGYTLVGVGAAAYSPAKYGILGELTTGSKLVKANGLMEASTIAAILLGSVAGGVLADW HVLVALAACALAYGGAVVANIYIPKLAAARPGQSWNLINMTRSFLNACTSLWRNGETRFSLVGTSLFWGAGVTLRFLLVL WVPVALGITDNATPTYLNAMVAIGIVVGAGAAAKLVTLETVSRCMPAGILIGVVVLIFSLQHELLPAYALLMLIGVLGGF FVVPLNALLQERGKKSVGAGNAIAVQNLGENSAMLLMLGIYSLAVMVGIPVVPIGIGFGTLFALAITALWIWQRRH
Specific function: Catalyzes the facilitated diffusion of 2-acyl-glycero-3- phosphoethanolamine (2-acyl-GPE) into the cell [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. LplT (TC 2.A.1.42) family [H]
Homologues:
Organism=Escherichia coli, GI1789200, Length=397, Percent_Identity=99.2443324937028, Blast_Score=778, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 41654; Mature: 41523
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSESVHTNTSLWSKGMKAVIVAQFLSAFGDNALLFATLALLKAQFYPEWSQPILQMVFVG CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH AYILFAPFVGQVADSFAKGRVMMFANGLKLLGAASICFGINPFLGYTLVGVGAAAYSPAK HHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHCHHHCCCCC YGILGELTTGSKLVKANGLMEASTIAAILLGSVAGGVLADWHVLVALAACALAYGGAVVA CCCEEECCCCCHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHEE NIYIPKLAAARPGQSWNLINMTRSFLNACTSLWRNGETRFSLVGTSLFWGAGVTLRFLLV HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHCCHHHHHHHH LWVPVALGITDNATPTYLNAMVAIGIVVGAGAAAKLVTLETVSRCMPAGILIGVVVLIFS HHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHH LQHELLPAYALLMLIGVLGGFFVVPLNALLQERGKKSVGAGNAIAVQNLGENSAMLLMLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHH IYSLAVMVGIPVVPIGIGFGTLFALAITALWIWQRRH HHHHHHHHCCCHHEECCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SESVHTNTSLWSKGMKAVIVAQFLSAFGDNALLFATLALLKAQFYPEWSQPILQMVFVG CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH AYILFAPFVGQVADSFAKGRVMMFANGLKLLGAASICFGINPFLGYTLVGVGAAAYSPAK HHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHCHHHCCCCC YGILGELTTGSKLVKANGLMEASTIAAILLGSVAGGVLADWHVLVALAACALAYGGAVVA CCCEEECCCCCHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHEE NIYIPKLAAARPGQSWNLINMTRSFLNACTSLWRNGETRFSLVGTSLFWGAGVTLRFLLV HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHCCHHHHHHHH LWVPVALGITDNATPTYLNAMVAIGIVVGAGAAAKLVTLETVSRCMPAGILIGVVVLIFS HHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHH LQHELLPAYALLMLIGVLGGFFVVPLNALLQERGKKSVGAGNAIAVQNLGENSAMLLMLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHH IYSLAVMVGIPVVPIGIGFGTLFALAITALWIWQRRH HHHHHHHHCCCHHEECCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA