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The map label for this gene is recO

Identifier: 157162044

GI number: 157162044

Start: 2740077

End: 2740805

Strand: Reverse

Name: recO

Synonym: EcHS_A2720

Alternate gene names: 157162044

Gene position: 2740805-2740077 (Counterclockwise)

Preceding gene: 157162045

Following gene: 157162043

Centisome position: 59.02

GC content: 53.64

Gene sequence:

>729_bases
ATGGAAGGCTGGCAGCGCGCATTTGTCCTGCATAGTCGCCCGTGGAGCGAAACCAGCCTGATGCTGGACGTCTTCACGGA
GGAATCGGGTCGCGTGCGTCTGGTTGCCAAAGGCGCACGCTCTAAACGCTCTACCCTGAAAGGTGCATTACAGCCTTTCA
CCCCTCTCTTGCTACGTTTCGGCGGGCGTGGCGAAGTCAAAACGTTGCGCAGTGCTGAAGCTGTCTCATTGGCGCTGCCA
TTAAGCGGTATCACGCTTTACAGCGGTCTGTACATCAACGAACTTCTCTCCCGCGTACTGGAATACGAGACGCGCTTCTC
TGAACTCTTTTTCGATTACTTGCACTGCATTCAATCTCTTGCAGGTGCCACTGGTACGCCAGAACCCGCGCTGCGCCGCT
TTGAACTGGCACTGCTCGGGCATCTGGGCTATGGCGTCAATTTTACCCATTGCGCAGGTAGCGGCGAGCCGGTAGATGAC
ACCATGACGTATCGTTATCGCGAAGAAAAAGGGTTTATCGCAAGCGTCGTTATCGACAATAAAACGTTCACCGGAAGGCA
GTTAAAAGCGTTAAACGCGCGGGAATTTCCTGACGCAGACACACTACGCGCCGCGAAACGCTTTACCCGCATGGCGCTTA
AGCCGTATCTTGGCGGTAAACCATTAAAGAGCAGGGAACTGTTCCGGCAGTTTATGCCTAAGCGAACGGTGAAAACACAT
TATGAATGA

Upstream 100 bases:

>100_bases
TTCACCTTGAACTGTGGGTAAAAGTGAAATCCGGTTGGGCCGACGACGAACGCGCACTGCGCAGTCTCGGTTACGTTGAC
GATCTTTAAGAGTAACTCCG

Downstream 100 bases:

>100_bases
TGAGGGTTGTCATGGCTGAATTACTTTTAGGCGTCAACATTGACCATATTGCAACGCTGCGTAACGCACGCGGTACTGCT
TACCCGGATCCGGTGCAGGC

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MEGWQRAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLRFGGRGEVKTLRSAEAVSLALP
LSGITLYSGLYINELLSRVLEYETRFSELFFDYLHCIQSLAGATGTPEPALRRFELALLGHLGYGVNFTHCAGSGEPVDD
TMTYRYREEKGFIASVVIDNKTFTGRQLKALNAREFPDADTLRAAKRFTRMALKPYLGGKPLKSRELFRQFMPKRTVKTH
YE

Sequences:

>Translated_242_residues
MEGWQRAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLRFGGRGEVKTLRSAEAVSLALP
LSGITLYSGLYINELLSRVLEYETRFSELFFDYLHCIQSLAGATGTPEPALRRFELALLGHLGYGVNFTHCAGSGEPVDD
TMTYRYREEKGFIASVVIDNKTFTGRQLKALNAREFPDADTLRAAKRFTRMALKPYLGGKPLKSRELFRQFMPKRTVKTH
YE
>Mature_242_residues
MEGWQRAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLRFGGRGEVKTLRSAEAVSLALP
LSGITLYSGLYINELLSRVLEYETRFSELFFDYLHCIQSLAGATGTPEPALRRFELALLGHLGYGVNFTHCAGSGEPVDD
TMTYRYREEKGFIASVVIDNKTFTGRQLKALNAREFPDADTLRAAKRFTRMALKPYLGGKPLKSRELFRQFMPKRTVKTH
YE

Specific function: Involved in DNA repair and recF pathway recombination

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family

Homologues:

Organism=Escherichia coli, GI2367140, Length=242, Percent_Identity=99.5867768595041, Blast_Score=491, Evalue=1e-140,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECO_ECO24 (A7ZQ09)

Other databases:

- EMBL:   CP000800
- RefSeq:   YP_001463888.1
- ProteinModelPortal:   A7ZQ09
- STRING:   A7ZQ09
- EnsemblBacteria:   EBESCT00000019831
- GeneID:   5585926
- GenomeReviews:   CP000800_GR
- KEGG:   ecw:EcE24377A_2851
- eggNOG:   COG1381
- GeneTree:   EBGT00050000011155
- HOGENOM:   HBG645116
- OMA:   SILQPFQ
- ProtClustDB:   PRK00085
- BioCyc:   ECOL331111:ECE24377A_2851-MONOMER
- HAMAP:   MF_00201
- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717
- TIGRFAMs:   TIGR00613

Pfam domain/function: PF02565 RecO; PF11967 RecO_N; SSF57863 ArfGAP; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 27363; Mature: 27363

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGWQRAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLRF
CCCHHEEEEEECCCCCCHHEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHC
GGRGEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELFFDYLHCIQSL
CCCCCHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGATGTPEPALRRFELALLGHLGYGVNFTHCAGSGEPVDDTMTYRYREEKGFIASVVIDN
HCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHEEEECCCCCEEEEEECC
KTFTGRQLKALNAREFPDADTLRAAKRFTRMALKPYLGGKPLKSRELFRQFMPKRTVKTH
CCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHCC
YE
CC
>Mature Secondary Structure
MEGWQRAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLRF
CCCHHEEEEEECCCCCCHHEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHC
GGRGEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELFFDYLHCIQSL
CCCCCHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGATGTPEPALRRFELALLGHLGYGVNFTHCAGSGEPVDDTMTYRYREEKGFIASVVIDN
HCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHEEEECCCCCEEEEEECC
KTFTGRQLKALNAREFPDADTLRAAKRFTRMALKPYLGGKPLKSRELFRQFMPKRTVKTH
CCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHCC
YE
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA