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The map label for this gene is nlpB

Identifier: 157161939

GI number: 157161939

Start: 2619738

End: 2620772

Strand: Reverse

Name: nlpB

Synonym: EcHS_A2609

Alternate gene names: 157161939

Gene position: 2620772-2619738 (Counterclockwise)

Preceding gene: 157161940

Following gene: 157161938

Centisome position: 56.44

GC content: 55.46

Gene sequence:

>1035_bases
ATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTGCGGGTGTTTCGCTTGTTTTATTACTCGCTGCCTGTAGTTC
TGACTCACGCTATAAGCGTCAGGTCAGTGGTGATGAAGCCTACCTGGAAGCGGCACCGCTTGCGGAGCTTCATGCCCCGG
CTGGAATGATTTTGCCGGTGACCTCCGGTGATTATGCAATCCCGGTGACCAACGGTAGTGGTGCTGTCGGTAAGGCGCTG
GACATTCGTCCACCAGCCCAGCCGCTGGCACTGGTTTCTGGCGCGCGTACCCAGTTCACGGGCGATACCGCTTCATTGCT
GGTGGAAAATGGTCGTGGCAATACTCTGTGGCCGCAGGTGGTTAGCGTGCTGCAGGCGAAAAACTACACCATCACCCAAC
GTGATGATGCTGGTCAGACACTGACCACCGATTGGGTACAATGGAACCGTCTGGACGAAGACGAGCAGTATCGTGGTCGT
TATCAAATCTCTGTTAAGCCGCAGGGTTATCAGCAGGCGGTTACGGTTAAACTGCTGAACCTGGAACAGGCGGGCAAACC
GGTTGCAGACGCGGCTTCCATGCAGCGTTACAGCACGGAGATGATGAACGTTATTTCCGCCGGTCTGGATAAATCTGCCA
CTGACGCCGCGAACGCTGCGCAAAATCGTGCCTCCACCACTATGGACGTACAAAGTGCAGCTGATGACACCGGTTTACCA
ATGCTGGTCGTACGCGGGCCGTTCAATGTGGTTTGGCAACGTCTGCCAGCGGCGCTGGAAAAAGTGGGCATGAAAGTGAC
CGACAGCACCCGTTCGCAGGGCAACATGGCCGTAACTTATAAGCCGCTGTCTGACAGCGACTGGCAGGAACTGGGCGCGA
GCGATCCAGGCCTGGCATCCGGTGACTATAAACTGCAGGTTGGCGATTTAGATAACCGCAGCAGCCTACAGTTCATCGAT
CCGAAAGGTCATACTCTGACTCAGAGTCAGAACGACGCGCTGGTAGCTGTCTTCCAGGCTGCGTTTAGCAAGTAA

Upstream 100 bases:

>100_bases
ACGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCGGTTTGCT
GTAAAGTTTAGGGAGATTTG

Downstream 100 bases:

>100_bases
AAATACAGGGCTGGAATCATCCGGCCCTTTTTTCTGATATGATACGCAAACGTGTGCGTCTGCAGGAAAACGCGATTTTA
GCGGTAATTCGCACGAAATT

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MAYSVQKSRLAKVAGVSLVLLLAACSSDSRYKRQVSGDEAYLEAAPLAELHAPAGMILPVTSGDYAIPVTNGSGAVGKAL
DIRPPAQPLALVSGARTQFTGDTASLLVENGRGNTLWPQVVSVLQAKNYTITQRDDAGQTLTTDWVQWNRLDEDEQYRGR
YQISVKPQGYQQAVTVKLLNLEQAGKPVADAASMQRYSTEMMNVISAGLDKSATDAANAAQNRASTTMDVQSAADDTGLP
MLVVRGPFNVVWQRLPAALEKVGMKVTDSTRSQGNMAVTYKPLSDSDWQELGASDPGLASGDYKLQVGDLDNRSSLQFID
PKGHTLTQSQNDALVAVFQAAFSK

Sequences:

>Translated_344_residues
MAYSVQKSRLAKVAGVSLVLLLAACSSDSRYKRQVSGDEAYLEAAPLAELHAPAGMILPVTSGDYAIPVTNGSGAVGKAL
DIRPPAQPLALVSGARTQFTGDTASLLVENGRGNTLWPQVVSVLQAKNYTITQRDDAGQTLTTDWVQWNRLDEDEQYRGR
YQISVKPQGYQQAVTVKLLNLEQAGKPVADAASMQRYSTEMMNVISAGLDKSATDAANAAQNRASTTMDVQSAADDTGLP
MLVVRGPFNVVWQRLPAALEKVGMKVTDSTRSQGNMAVTYKPLSDSDWQELGASDPGLASGDYKLQVGDLDNRSSLQFID
PKGHTLTQSQNDALVAVFQAAFSK
>Mature_343_residues
AYSVQKSRLAKVAGVSLVLLLAACSSDSRYKRQVSGDEAYLEAAPLAELHAPAGMILPVTSGDYAIPVTNGSGAVGKALD
IRPPAQPLALVSGARTQFTGDTASLLVENGRGNTLWPQVVSVLQAKNYTITQRDDAGQTLTTDWVQWNRLDEDEQYRGRY
QISVKPQGYQQAVTVKLLNLEQAGKPVADAASMQRYSTEMMNVISAGLDKSATDAANAAQNRASTTMDVQSAADDTGLPM
LVVRGPFNVVWQRLPAALEKVGMKVTDSTRSQGNMAVTYKPLSDSDWQELGASDPGLASGDYKLQVGDLDNRSSLQFIDP
KGHTLTQSQNDALVAVFQAAFSK

Specific function: Non-essential lipoprotein

COG id: COG3317

COG function: function code M; Uncharacterized lipoprotein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082112, Length=344, Percent_Identity=100, Blast_Score=698, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NLPB_ECOLI (P0A903)

Other databases:

- EMBL:   X57402
- EMBL:   M33928
- EMBL:   U00096
- EMBL:   AP009048
- PIR:   D65023
- RefSeq:   AP_003063.1
- RefSeq:   NP_416972.4
- ProteinModelPortal:   P0A903
- STRING:   P0A903
- SWISS-2DPAGE:   P0A903
- EnsemblBacteria:   EBESCT00000000775
- EnsemblBacteria:   EBESCT00000000776
- EnsemblBacteria:   EBESCT00000015605
- GeneID:   946954
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW2462
- KEGG:   eco:b2477
- EchoBASE:   EB0652
- EcoGene:   EG10658
- eggNOG:   COG3317
- GeneTree:   EBGT00050000010836
- HOGENOM:   HBG391161
- OMA:   EDKRRYT
- ProtClustDB:   PRK11679
- BioCyc:   EcoCyc:EG10658-MONOMER
- Genevestigator:   P0A903
- InterPro:   IPR010653
- InterPro:   IPR014524
- PIRSF:   PIRSF026343

Pfam domain/function: PF06804 Lipoprotein_18

EC number: NA

Molecular weight: Translated: 36843; Mature: 36712

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN ; PS00572 GLYCOSYL_HYDROL_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYSVQKSRLAKVAGVSLVLLLAACSSDSRYKRQVSGDEAYLEAAPLAELHAPAGMILPV
CCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHEECCCHHHHCCCCCEEEEE
TSGDYAIPVTNGSGAVGKALDIRPPAQPLALVSGARTQFTGDTASLLVENGRGNTLWPQV
CCCCEEEEEECCCCCCCCEEECCCCCCHHHHHCCCCEEECCCCEEEEEECCCCCCHHHHH
VSVLQAKNYTITQRDDAGQTLTTDWVQWNRLDEDEQYRGRYQISVKPQGYQQAVTVKLLN
HHHHHHCCCEEEECCCCCCEEEEHHHECCCCCCCHHHCCEEEEEECCCCCCEEEEEEEEE
LEQAGKPVADAASMQRYSTEMMNVISAGLDKSATDAANAAQNRASTTMDVQSAADDTGLP
HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEHHHCCCCCCCE
MLVVRGPFNVVWQRLPAALEKVGMKVTDSTRSQGNMAVTYKPLSDSDWQELGASDPGLAS
EEEEECCHHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEEECCCCCCHHHHCCCCCCCCC
GDYKLQVGDLDNRSSLQFIDPKGHTLTQSQNDALVAVFQAAFSK
CCEEEEECCCCCCCCEEEECCCCCEECCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
AYSVQKSRLAKVAGVSLVLLLAACSSDSRYKRQVSGDEAYLEAAPLAELHAPAGMILPV
CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHEECCCHHHHCCCCCEEEEE
TSGDYAIPVTNGSGAVGKALDIRPPAQPLALVSGARTQFTGDTASLLVENGRGNTLWPQV
CCCCEEEEEECCCCCCCCEEECCCCCCHHHHHCCCCEEECCCCEEEEEECCCCCCHHHHH
VSVLQAKNYTITQRDDAGQTLTTDWVQWNRLDEDEQYRGRYQISVKPQGYQQAVTVKLLN
HHHHHHCCCEEEECCCCCCEEEEHHHECCCCCCCHHHCCEEEEEECCCCCCEEEEEEEEE
LEQAGKPVADAASMQRYSTEMMNVISAGLDKSATDAANAAQNRASTTMDVQSAADDTGLP
HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEHHHCCCCCCCE
MLVVRGPFNVVWQRLPAALEKVGMKVTDSTRSQGNMAVTYKPLSDSDWQELGASDPGLAS
EEEEECCHHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEEECCCCCCHHHHCCCCCCCCC
GDYKLQVGDLDNRSSLQFIDPKGHTLTQSQNDALVAVFQAAFSK
CCEEEEECCCCCCCCEEEECCCCCEECCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1885529; 2120198; 9205837; 9278503