Click here to switch to the map view.

The map label for this gene is yfdF [H]

Identifier: 157161833

GI number: 157161833

Start: 2504632

End: 2505690

Strand: Direct

Name: yfdF [H]

Synonym: EcHS_A2496

Alternate gene names: 157161833

Gene position: 2504632-2505690 (Clockwise)

Preceding gene: 157161832

Following gene: 157161836

Centisome position: 53.94

GC content: 35.6

Gene sequence:

>1059_bases
ATGCTACCATCTATTTCAATCAACAATACCAGCGCTGCTTACACAGAATCCATCAATGAAAATAACAATGATGAAGTTAA
TGGATTAGTACAAGAGTTCAAAAACCTTTTTAATGGTAAGGAAGGAATAAGCACCTGTATTAAACATCTACTTGAGCTTA
TAAAAAATGCCATACGAGGAAACAGCAATCCTGAGAGAATTAATATCAATAATTCCGCAGTTACTTATATCGATATTGGC
TCCAATGATACAGACCATATTACTATTAGTATCGATAACCAAGAACCAATAAAATTACCTGCGAACTATAAAGACAAAGA
ACTCGTCCGTACTATCATTAATGACAACATAGTTGAGAAGACTCATGATATCAATAACAAGGAAATGATCTTCAGCGCAT
TAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTT
GATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGTACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGT
AATTAAAAATAAAAACGGAAATGATTACTTATCTCTCGGTTACTACGATCAGGACGACTACCACATTCAAAGAGGAATTC
GTATTAATGGTGATAGTCTCACCCAACATTGTAGTGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTAAAGCT
ATCATGGCAGAATCATTTGCAACTGGTTCCGATCATCAGGTTGTAAACGAGCTCAACGGGGAAAGACTGAGAGAACCAAA
CGACGTTTTTAAACGTTATGGTCGAGCAATAAGATATGATTTTCAAGTGGACGATGCAAAATATAAATGCGACCATCTAA
AAGAAATAGTTTCTACTTTAGTCGGTAACAAAATTAACGTTGGCCATTCTCAAAAAATATATAAGCATTTTAAGGATCTC
GAAGGTAAAATTGAAGAAAGGCTTCAAAATCGCCAGGCTAAATATCAAAATGAAATTAATCAACCATCTGCGCCAGGTGT
TAATTTTGATGATATTTAA

Upstream 100 bases:

>100_bases
GCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTTATTAGGTAATATATATTTGTAACAAATC
AATCAACATGGAATAAAATC

Downstream 100 bases:

>100_bases
AATTATTTTTCCAGTTTTTTGATTTTTCAACAGCTGAATATCGGAAATAGTCAGTGACGAACATCAGTATTTTTACATAA
TTACGTCTAGGTCATTGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MLPSISINNTSAAYTESINENNNDEVNGLVQEFKNLFNGKEGISTCIKHLLELIKNAIRGNSNPERININNSAVTYIDIG
SNDTDHITISIDNQEPIKLPANYKDKELVRTIINDNIVEKTHDINNKEMIFSALKEIYDGDPGFIFDKISHKLRHTVTEF
DESGKSEPTDLFTWYGKDKKGDSLAIVIKNKNGNDYLSLGYYDQDDYHIQRGIRINGDSLTQHCSENARSASAWFESSKA
IMAESFATGSDHQVVNELNGERLREPNDVFKRYGRAIRYDFQVDDAKYKCDHLKEIVSTLVGNKINVGHSQKIYKHFKDL
EGKIEERLQNRQAKYQNEINQPSAPGVNFDDI

Sequences:

>Translated_352_residues
MLPSISINNTSAAYTESINENNNDEVNGLVQEFKNLFNGKEGISTCIKHLLELIKNAIRGNSNPERININNSAVTYIDIG
SNDTDHITISIDNQEPIKLPANYKDKELVRTIINDNIVEKTHDINNKEMIFSALKEIYDGDPGFIFDKISHKLRHTVTEF
DESGKSEPTDLFTWYGKDKKGDSLAIVIKNKNGNDYLSLGYYDQDDYHIQRGIRINGDSLTQHCSENARSASAWFESSKA
IMAESFATGSDHQVVNELNGERLREPNDVFKRYGRAIRYDFQVDDAKYKCDHLKEIVSTLVGNKINVGHSQKIYKHFKDL
EGKIEERLQNRQAKYQNEINQPSAPGVNFDDI
>Mature_352_residues
MLPSISINNTSAAYTESINENNNDEVNGLVQEFKNLFNGKEGISTCIKHLLELIKNAIRGNSNPERININNSAVTYIDIG
SNDTDHITISIDNQEPIKLPANYKDKELVRTIINDNIVEKTHDINNKEMIFSALKEIYDGDPGFIFDKISHKLRHTVTEF
DESGKSEPTDLFTWYGKDKKGDSLAIVIKNKNGNDYLSLGYYDQDDYHIQRGIRINGDSLTQHCSENARSASAWFESSKA
IMAESFATGSDHQVVNELNGERLREPNDVFKRYGRAIRYDFQVDDAKYKCDHLKEIVSTLVGNKINVGHSQKIYKHFKDL
EGKIEERLQNRQAKYQNEINQPSAPGVNFDDI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788687, Length=352, Percent_Identity=96.5909090909091, Blast_Score=697, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40042; Mature: 40042

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPSISINNTSAAYTESINENNNDEVNGLVQEFKNLFNGKEGISTCIKHLLELIKNAIRG
CCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC
NSNPERININNSAVTYIDIGSNDTDHITISIDNQEPIKLPANYKDKELVRTIINDNIVEK
CCCCCEEEECCCEEEEEECCCCCCCEEEEEECCCCCEECCCCCCHHHHHHHHHCCHHHHH
THDINNKEMIFSALKEIYDGDPGFIFDKISHKLRHTVTEFDESGKSEPTDLFTWYGKDKK
HHCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCC
GDSLAIVIKNKNGNDYLSLGYYDQDDYHIQRGIRINGDSLTQHCSENARSASAWFESSKA
CCEEEEEEECCCCCCEEEECCCCCCCCEEECCCEECCHHHHHHHHHHHHHHHHHHHHCHH
IMAESFATGSDHQVVNELNGERLREPNDVFKRYGRAIRYDFQVDDAKYKCDHLKEIVSTL
HHHHHCCCCCCHHHHHHCCHHHCCCHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHH
VGNKINVGHSQKIYKHFKDLEGKIEERLQNRQAKYQNEINQPSAPGVNFDDI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MLPSISINNTSAAYTESINENNNDEVNGLVQEFKNLFNGKEGISTCIKHLLELIKNAIRG
CCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC
NSNPERININNSAVTYIDIGSNDTDHITISIDNQEPIKLPANYKDKELVRTIINDNIVEK
CCCCCEEEECCCEEEEEECCCCCCCEEEEEECCCCCEECCCCCCHHHHHHHHHCCHHHHH
THDINNKEMIFSALKEIYDGDPGFIFDKISHKLRHTVTEFDESGKSEPTDLFTWYGKDKK
HHCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCC
GDSLAIVIKNKNGNDYLSLGYYDQDDYHIQRGIRINGDSLTQHCSENARSASAWFESSKA
CCEEEEEEECCCCCCEEEECCCCCCCCEEECCCEECCHHHHHHHHHHHHHHHHHHHHCHH
IMAESFATGSDHQVVNELNGERLREPNDVFKRYGRAIRYDFQVDDAKYKCDHLKEIVSTL
HHHHHCCCCCCHHHHHHCCHHHCCCHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHH
VGNKINVGHSQKIYKHFKDLEGKIEERLQNRQAKYQNEINQPSAPGVNFDDI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]