Definition | Escherichia coli HS, complete genome. |
---|---|
Accession | NC_009800 |
Length | 4,643,538 |
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The map label for this gene is yfcZ [H]
Identifier: 157161831
GI number: 157161831
Start: 2502270
End: 2502554
Strand: Reverse
Name: yfcZ [H]
Synonym: EcHS_A2494
Alternate gene names: 157161831
Gene position: 2502554-2502270 (Counterclockwise)
Preceding gene: 157161834
Following gene: 157161830
Centisome position: 53.89
GC content: 52.63
Gene sequence:
>285_bases ATGAGTAAATGTAGTGCTGATGAAACCCCGGTTTGCTGCTGTATGGATGTTGGCACCATTATGGACAACTCCGACTGCAC CGCGTCTTACAGCCGCGTGTTTGCAAACCGCGCAGAAGCAGAACAAACGCTGGCGGCGCTGACTGAGAAAGCCCGTAGCG TGGAATCCGAACCGTGCAAAATCTCCCCGACTTTCACTGAAGAGTCTGACGGTGTGCGCCTGGATATCGATTTCACTTTT GCCTGCGAAGCTGAAATGCTGATCTTCCAGCTGGGTCTGCGTTAA
Upstream 100 bases:
>100_bases GATTTTGCAGAATTAACAACTGGAGCAGCACTTTCCGGAAGCGTAAAATATCCACAACGTTTATCTGGCACCTTGGGTGC ACATACAGAGGAAATCAACG
Downstream 100 bases:
>100_bases TTCCTCTCGGGTACGTACGCCCCTGTCAGTTGCTGGCAGGGGCGTTTTCTTTTCTCTTCTTCTTTTCTCTCTGTGTCATA GCTCCCACTTTCCCTTTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 94; Mature: 93
Protein sequence:
>94_residues MSKCSADETPVCCCMDVGTIMDNSDCTASYSRVFANRAEAEQTLAALTEKARSVESEPCKISPTFTEESDGVRLDIDFTF ACEAEMLIFQLGLR
Sequences:
>Translated_94_residues MSKCSADETPVCCCMDVGTIMDNSDCTASYSRVFANRAEAEQTLAALTEKARSVESEPCKISPTFTEESDGVRLDIDFTF ACEAEMLIFQLGLR >Mature_93_residues SKCSADETPVCCCMDVGTIMDNSDCTASYSRVFANRAEAEQTLAALTEKARSVESEPCKISPTFTEESDGVRLDIDFTFA CEAEMLIFQLGLR
Specific function: Unknown
COG id: COG3691
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0381 family [H]
Homologues:
Organism=Escherichia coli, GI87082087, Length=94, Percent_Identity=98.936170212766, Blast_Score=190, Evalue=1e-50, Organism=Escherichia coli, GI1790357, Length=84, Percent_Identity=42.8571428571429, Blast_Score=73, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005272 [H]
Pfam domain/function: PF04175 DUF406 [H]
EC number: NA
Molecular weight: Translated: 10304; Mature: 10172
Theoretical pI: Translated: 4.00; Mature: 4.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.4 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 11.7 %Cys+Met (Translated Protein) 7.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 10.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKCSADETPVCCCMDVGTIMDNSDCTASYSRVFANRAEAEQTLAALTEKARSVESEPCK CCCCCCCCCCEEEEEECCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE ISPTFTEESDGVRLDIDFTFACEAEMLIFQLGLR ECCCCCCCCCCEEEEEEEEEECCHHEEEEEECCC >Mature Secondary Structure SKCSADETPVCCCMDVGTIMDNSDCTASYSRVFANRAEAEQTLAALTEKARSVESEPCK CCCCCCCCCEEEEEECCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE ISPTFTEESDGVRLDIDFTFACEAEMLIFQLGLR ECCCCCCCCCCEEEEEEEEEECCHHEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]