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The map label for this gene is yfcO [H]

Identifier: 157161821

GI number: 157161821

Start: 2490800

End: 2491657

Strand: Reverse

Name: yfcO [H]

Synonym: EcHS_A2484

Alternate gene names: 157161821

Gene position: 2491657-2490800 (Counterclockwise)

Preceding gene: 157161822

Following gene: 157161819

Centisome position: 53.66

GC content: 46.97

Gene sequence:

>858_bases
ATGAAAATTCTACGTTATGTCTTTTACTTTTTGCTGCTCATTTGCCTCAGCACAGGAGTGCAGGCCGCGAAAAAGATCGC
GACGTTATACATTCCTGCGGGATCAATGGGAGTGCTCACAGGTTTTCAGTTTAATCTTTCTATCCTCACACCAGAAGGCG
CGCAATATGGGGTATATCAATCCAGGTCAGTTGCGATTTTGAATGTGCCACTAGTATCATGGACTGGTCAAGGTACTGCT
CCGGAACTGCATTTAGAAGACGCAAGAACCATATTACCAACTTCACGTTGCCCGGGCCTTGAAGAATATGATGCTCGCAC
CCCACAAACGACCTGGGCCTGCGTGGAAATGAAAGTCACAGTTTTCTATGACGGTGATATGCATGGTTGTCCGTGGATAG
TTTCCTCGTATGTAAAGAGTGAGGACGCAACGGAGGCAATATATACAGGTAATAATGTTCCCTATATTGGCCCGACAAAA
GTCAGTTCTGACTGTAGCGCAATACCTTTAGATCCTTATGATGTCTCCTGGAATGAAAATACGGTCGTGCATAACAAAAT
AGTCAGGATGCAATCAACAGGTGCTGTGATTGAACAAACGCTGCCCACTTATCTGATGGAAGGTGGAAAACTGTGTGATG
GTAGTAAATATGACGAGCGTGGTGCTTACTGCCGTTTTGTCGCACAGCAGATGACCTTCTCCACTTCGGGCTGTGACGAT
GCCAAAGTGACAGTGACGCCAGAGCCGCAACCGATCACGTCCAGGCAACTGCATGATATGAAGCTACGCGTGGACACAAC
GGCGCAACAGCCAATAGATGCCACCTGCCGGTTCACTTACATACTGAATATGTACTAG

Upstream 100 bases:

>100_bases
GATATTAATTTCCGGGCCTGGATCCAGGCGAAAAGCGGTCGCGATGTGACGATCGGTGAATTCACTGCCAGCCTGACCGC
TACCTTCGAGTATATTTAAA

Downstream 100 bases:

>100_bases
TGCGTCTTTTTCACAAGGCAGGGTCATTTGACCCTGCCATTCCCCGTACATGGCGCAACGCGCTAAACTTCTCAGGGTAA
CTCCGGCGGCAGCCACTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MKILRYVFYFLLLICLSTGVQAAKKIATLYIPAGSMGVLTGFQFNLSILTPEGAQYGVYQSRSVAILNVPLVSWTGQGTA
PELHLEDARTILPTSRCPGLEEYDARTPQTTWACVEMKVTVFYDGDMHGCPWIVSSYVKSEDATEAIYTGNNVPYIGPTK
VSSDCSAIPLDPYDVSWNENTVVHNKIVRMQSTGAVIEQTLPTYLMEGGKLCDGSKYDERGAYCRFVAQQMTFSTSGCDD
AKVTVTPEPQPITSRQLHDMKLRVDTTAQQPIDATCRFTYILNMY

Sequences:

>Translated_285_residues
MKILRYVFYFLLLICLSTGVQAAKKIATLYIPAGSMGVLTGFQFNLSILTPEGAQYGVYQSRSVAILNVPLVSWTGQGTA
PELHLEDARTILPTSRCPGLEEYDARTPQTTWACVEMKVTVFYDGDMHGCPWIVSSYVKSEDATEAIYTGNNVPYIGPTK
VSSDCSAIPLDPYDVSWNENTVVHNKIVRMQSTGAVIEQTLPTYLMEGGKLCDGSKYDERGAYCRFVAQQMTFSTSGCDD
AKVTVTPEPQPITSRQLHDMKLRVDTTAQQPIDATCRFTYILNMY
>Mature_285_residues
MKILRYVFYFLLLICLSTGVQAAKKIATLYIPAGSMGVLTGFQFNLSILTPEGAQYGVYQSRSVAILNVPLVSWTGQGTA
PELHLEDARTILPTSRCPGLEEYDARTPQTTWACVEMKVTVFYDGDMHGCPWIVSSYVKSEDATEAIYTGNNVPYIGPTK
VSSDCSAIPLDPYDVSWNENTVVHNKIVRMQSTGAVIEQTLPTYLMEGGKLCDGSKYDERGAYCRFVAQQMTFSTSGCDD
AKVTVTPEPQPITSRQLHDMKLRVDTTAQQPIDATCRFTYILNMY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To S.typhimurium yadU [H]

Homologues:

Organism=Escherichia coli, GI87082086, Length=289, Percent_Identity=40.4844290657439, Blast_Score=208, Evalue=4e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021407 [H]

Pfam domain/function: PF11245 DUF2544 [H]

EC number: NA

Molecular weight: Translated: 31599; Mature: 31599

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILRYVFYFLLLICLSTGVQAAKKIATLYIPAGSMGVLTGFQFNLSILTPEGAQYGVYQ
CHHHHHHHHHHHHHHHHCCHHHHHEEEEEEECCCCCEEEEEEEEEEEEECCCCCEECCCC
SRSVAILNVPLVSWTGQGTAPELHLEDARTILPTSRCPGLEEYDARTPQTTWACVEMKVT
CCCEEEEEEEEEEECCCCCCCEEECCCCCEECCCCCCCCCHHHCCCCCCCEEEEEEEEEE
VFYDGDMHGCPWIVSSYVKSEDATEAIYTGNNVPYIGPTKVSSDCSAIPLDPYDVSWNEN
EEECCCCCCCHHHHHHHHCCCCCCEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCC
TVVHNKIVRMQSTGAVIEQTLPTYLMEGGKLCDGSKYDERGAYCRFVAQQMTFSTSGCDD
EEEEHEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHEECCCCCCC
AKVTVTPEPQPITSRQLHDMKLRVDTTAQQPIDATCRFTYILNMY
CEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MKILRYVFYFLLLICLSTGVQAAKKIATLYIPAGSMGVLTGFQFNLSILTPEGAQYGVYQ
CHHHHHHHHHHHHHHHHCCHHHHHEEEEEEECCCCCEEEEEEEEEEEEECCCCCEECCCC
SRSVAILNVPLVSWTGQGTAPELHLEDARTILPTSRCPGLEEYDARTPQTTWACVEMKVT
CCCEEEEEEEEEEECCCCCCCEEECCCCCEECCCCCCCCCHHHCCCCCCCEEEEEEEEEE
VFYDGDMHGCPWIVSSYVKSEDATEAIYTGNNVPYIGPTKVSSDCSAIPLDPYDVSWNEN
EEECCCCCCCHHHHHHHHCCCCCCEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCC
TVVHNKIVRMQSTGAVIEQTLPTYLMEGGKLCDGSKYDERGAYCRFVAQQMTFSTSGCDD
EEEEHEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHEECCCCCCC
AKVTVTPEPQPITSRQLHDMKLRVDTTAQQPIDATCRFTYILNMY
CEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]