Definition | Escherichia coli HS, complete genome. |
---|---|
Accession | NC_009800 |
Length | 4,643,538 |
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The map label for this gene is aroC [H]
Identifier: 157161818
GI number: 157161818
Start: 2487959
End: 2489044
Strand: Reverse
Name: aroC [H]
Synonym: EcHS_A2481
Alternate gene names: 157161818
Gene position: 2489044-2487959 (Counterclockwise)
Preceding gene: 157161819
Following gene: 157161817
Centisome position: 53.6
GC content: 57.0
Gene sequence:
>1086_bases ATGGCTGGAAACACAATTGGACAACTCTTTCGCGTAACCACCTTCGGCGAATCGCACGGGCTGGCGCTCGGCTGCATCGT CGATGGTGTTCCGCCAGGCATTCCGCTGACGGAAGCGGACCTGCAACATGACCTCGACCGTCGTCGCCCTGGGACATCGC GCTATACCACCCAGCGCCGCGAGCCGGATCAGGTCAAAATTCTCTCCGGTGTTTTTGAAGGCGTTACTACCGGCACCAGC ATTGGCTTGTTGATCGAAAACACTGACCAGCGCTCTCAGGATTACAGTGCGATTAAGGACGTTTTCCGTCCAGGCCATGC CGATTACACCTACGAACAAAAATACGGTCTGCGCGATTATCGCGGCGGTGGACGTTCTTCCGCCCGCGAAACCGCCATGC GCGTGGCGGCAGGAGCTATTGCCAAAAAATATCTCGCCGAGAAATTTGGTATTGAAATCCGTGGCTGCCTGACCCAGATG GGCGACATTCCGCTGGATATCAAAGACTGGTCGCAGGTCGAGCAAAATCCGTTTTTTTGCCCGGACCCCGACAAAATCGA CGCGTTAGACGAGTTGATGCGTGCGCTGAAAAAAGAGGGCGACTCCATCGGCGCTAAAGTCACCGTTGTTGCCAGTGGCG TTCCTGCCGGACTTGGCGAGCCGGTCTTTGACCGCCTGGATGCTGACATCGCCCATGCGCTGATGAGCATCAACGCGGTG AAAGGCGTGGAAATTGGCGACGGCTTTGACGTGGTGGCGCTGCGCGGCAGCCAGAACCGCGACGAAATCACCAAAGACGG TTTCCAGAGCAACCATGCGGGCGGCATTCTCGGCGGTATCAGCAGCGGGCAGCAAATCATTGCTCATATGGCGCTGAAAC CGACCTCCAGTATCACCGTGCCGGGGCGTACCATTAACCGCTTTGGCGAAGAAGTTGAGATGATCACCAAAGGCCGTCAC GATCCCTGTGTCGGGATCCGCGCCGTGCCGATCGCAGAAGCGATGCTGGCGATCGTATTAATGGATCACCTGTTACGGCA GCGGGCGCAAAATGCCGATGTGAAGACTGATATTCCACGCTGGTAA
Upstream 100 bases:
>100_bases GTGTTTATGCTCACCAAAGAGCAGCTTATTGCCGCACGAGAACATTTCGCGATTTATAAAGATTAAGTAAACACGCAAAC ACAACAATAACGGAGCCGTG
Downstream 100 bases:
>100_bases AAAATGAACAAAACCGCGATTGCGCTGCTGGCCCTGCTTGCCAGTAGCGCCAGCCTGGCAGCGACGCCGTGGCAAAAAAT AACCCAACCTGTGCCGGGTA
Product: chorismate synthase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate phospholyase [H]
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MAGNTIGQLFRVTTFGESHGLALGCIVDGVPPGIPLTEADLQHDLDRRRPGTSRYTTQRREPDQVKILSGVFEGVTTGTS IGLLIENTDQRSQDYSAIKDVFRPGHADYTYEQKYGLRDYRGGGRSSARETAMRVAAGAIAKKYLAEKFGIEIRGCLTQM GDIPLDIKDWSQVEQNPFFCPDPDKIDALDELMRALKKEGDSIGAKVTVVASGVPAGLGEPVFDRLDADIAHALMSINAV KGVEIGDGFDVVALRGSQNRDEITKDGFQSNHAGGILGGISSGQQIIAHMALKPTSSITVPGRTINRFGEEVEMITKGRH DPCVGIRAVPIAEAMLAIVLMDHLLRQRAQNADVKTDIPRW
Sequences:
>Translated_361_residues MAGNTIGQLFRVTTFGESHGLALGCIVDGVPPGIPLTEADLQHDLDRRRPGTSRYTTQRREPDQVKILSGVFEGVTTGTS IGLLIENTDQRSQDYSAIKDVFRPGHADYTYEQKYGLRDYRGGGRSSARETAMRVAAGAIAKKYLAEKFGIEIRGCLTQM GDIPLDIKDWSQVEQNPFFCPDPDKIDALDELMRALKKEGDSIGAKVTVVASGVPAGLGEPVFDRLDADIAHALMSINAV KGVEIGDGFDVVALRGSQNRDEITKDGFQSNHAGGILGGISSGQQIIAHMALKPTSSITVPGRTINRFGEEVEMITKGRH DPCVGIRAVPIAEAMLAIVLMDHLLRQRAQNADVKTDIPRW >Mature_360_residues AGNTIGQLFRVTTFGESHGLALGCIVDGVPPGIPLTEADLQHDLDRRRPGTSRYTTQRREPDQVKILSGVFEGVTTGTSI GLLIENTDQRSQDYSAIKDVFRPGHADYTYEQKYGLRDYRGGGRSSARETAMRVAAGAIAKKYLAEKFGIEIRGCLTQMG DIPLDIKDWSQVEQNPFFCPDPDKIDALDELMRALKKEGDSIGAKVTVVASGVPAGLGEPVFDRLDADIAHALMSINAVK GVEIGDGFDVVALRGSQNRDEITKDGFQSNHAGGILGGISSGQQIIAHMALKPTSSITVPGRTINRFGEEVEMITKGRHD PCVGIRAVPIAEAMLAIVLMDHLLRQRAQNADVKTDIPRW
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; seventh step. [C]
COG id: COG0082
COG function: function code E; Chorismate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chorismate synthase family [H]
Homologues:
Organism=Escherichia coli, GI1788669, Length=361, Percent_Identity=100, Blast_Score=738, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6321290, Length=368, Percent_Identity=45.6521739130435, Blast_Score=311, Evalue=7e-86,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000453 - InterPro: IPR020541 [H]
Pfam domain/function: PF01264 Chorismate_synt [H]
EC number: =4.2.3.5 [H]
Molecular weight: Translated: 39138; Mature: 39007
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: PS00787 CHORISMATE_SYNTHASE_1 ; PS00788 CHORISMATE_SYNTHASE_2 ; PS00789 CHORISMATE_SYNTHASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGNTIGQLFRVTTFGESHGLALGCIVDGVPPGIPLTEADLQHDLDRRRPGTSRYTTQRR CCCCHHHHHHHHEECCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC EPDQVKILSGVFEGVTTGTSIGLLIENTDQRSQDYSAIKDVFRPGHADYTYEQKYGLRDY CCCHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCHHHHCCCHHC RGGGRSSARETAMRVAAGAIAKKYLAEKFGIEIRGCLTQMGDIPLDIKDWSQVEQNPFFC CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCC PDPDKIDALDELMRALKKEGDSIGAKVTVVASGVPAGLGEPVFDRLDADIAHALMSINAV CCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH KGVEIGDGFDVVALRGSQNRDEITKDGFQSNHAGGILGGISSGQQIIAHMALKPTSSITV CCCEECCCCEEEEECCCCCHHHHHHCCCCCCCCCCEECCCCCHHHHHHHHHCCCCCCEEE PGRTINRFGEEVEMITKGRHDPCVGIRAVPIAEAMLAIVLMDHLLRQRAQNADVKTDIPR CCHHHHHHHHHHHHHHCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC W C >Mature Secondary Structure AGNTIGQLFRVTTFGESHGLALGCIVDGVPPGIPLTEADLQHDLDRRRPGTSRYTTQRR CCCHHHHHHHHEECCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC EPDQVKILSGVFEGVTTGTSIGLLIENTDQRSQDYSAIKDVFRPGHADYTYEQKYGLRDY CCCHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCHHHHCCCHHC RGGGRSSARETAMRVAAGAIAKKYLAEKFGIEIRGCLTQMGDIPLDIKDWSQVEQNPFFC CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCC PDPDKIDALDELMRALKKEGDSIGAKVTVVASGVPAGLGEPVFDRLDADIAHALMSINAV CCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH KGVEIGDGFDVVALRGSQNRDEITKDGFQSNHAGGILGGISSGQQIIAHMALKPTSSITV CCCEECCCCEEEEECCCCCHHHHHHCCCCCCCCCCEECCCCCHHHHHHHHHCCCCCCEEE PGRTINRFGEEVEMITKGRHDPCVGIRAVPIAEAMLAIVLMDHLLRQRAQNADVKTDIPR CCHHHHHHHHHHHHHHCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC W C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA