Definition | Escherichia coli HS, complete genome. |
---|---|
Accession | NC_009800 |
Length | 4,643,538 |
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The map label for this gene is yeaD [H]
Identifier: 157161241
GI number: 157161241
Start: 1881806
End: 1882711
Strand: Direct
Name: yeaD [H]
Synonym: EcHS_A1865
Alternate gene names: 157161241
Gene position: 1881806-1882711 (Clockwise)
Preceding gene: 157161240
Following gene: 157161244
Centisome position: 40.53
GC content: 49.67
Gene sequence:
>906_bases ATGAAGTTAAAGGACTGCGTCATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTCCTCTCCCG TCGTAAACTGGATGAACTGGACCTCATTGTGGTCGATCATCCCCAGGTAAAAGCCTCTTTTGCATTACAGGGCGCACACC TTCTCTCGTGGAAACCTGCGGGTGAAGAAGAAGTTCTGTGGTTGAGCAACAACACACCGTTCAAAAATGGCGTCGCTATT CGCGGTGGCGTACCGGTTTGCTGGCCGTGGTTTGGTCCGGCGGCACAACAAGGTCTGCCTGCGCACGGTTTTGCCCGCAA CCTGCCGTGGACGCTGAAATCACATCATGAAGATGCTGATGGCGTAGCGCTGACTTTTGAATTGACGCAAAGCGAAGAGA CGAAAAAATTCTGGCCGCACGACTTTACGCTGTTAGCGCATTTCCGCGTGGGTAAAACTTGTGAAATCGATCTTGAATCA CATGGCGAATTTGAAACCACCTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCT GGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACTGACCGATGGTATTCAGACCTTCCCTGACCGTA CCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTAGGCCAC CAGCATCATCTGAACGTTGTCGGCTGGAACCCGGGACCGGCGCTTTCAATTAGCATGGGCGATATGCCGGATGATGGCTA CAAAACATTTGTTTGTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGC AATCCATTCGCGTTGCGAAACGTTAA
Upstream 100 bases:
>100_bases ACAAAGTTCTGGACCTGATCGCTCACATCTCCAAATAAGTTGAGATGACACTGTGATCTAAAAAGAGCGACTTCGGTCGC TCTTTTTTTTACCTGATAAA
Downstream 100 bases:
>100_bases TTTACGTTAATGTTGTGTGCCGGGTGCGATGCATCCGGCACACAACATCACACCATATCCAGCGCAGTTTTTCCTTTTGG TGCCGGATATGCCTTATCCA
Product: aldose 1-epimerase family protein
Products: NA
Alternate protein names: Putative D-hexose-6-phosphate mutarotase; Unknown protein from 2D-page spots T26/PR37 [H]
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MKLKDCVMIKKIFALPVIEQISPVLSRRKLDELDLIVVDHPQVKASFALQGAHLLSWKPAGEEEVLWLSNNTPFKNGVAI RGGVPVCWPWFGPAAQQGLPAHGFARNLPWTLKSHHEDADGVALTFELTQSEETKKFWPHDFTLLAHFRVGKTCEIDLES HGEFETTSALHTYFNVGDIAKVSVSGLGDRFIDKVNDAKENVLTDGIQTFPDRTDRVYLNPQDCSVINDEALNRIIAVGH QHHLNVVGWNPGPALSISMGDMPDDGYKTFVCVETAYASETQKVTKEKPAHLAQSIRVAKR
Sequences:
>Translated_301_residues MKLKDCVMIKKIFALPVIEQISPVLSRRKLDELDLIVVDHPQVKASFALQGAHLLSWKPAGEEEVLWLSNNTPFKNGVAI RGGVPVCWPWFGPAAQQGLPAHGFARNLPWTLKSHHEDADGVALTFELTQSEETKKFWPHDFTLLAHFRVGKTCEIDLES HGEFETTSALHTYFNVGDIAKVSVSGLGDRFIDKVNDAKENVLTDGIQTFPDRTDRVYLNPQDCSVINDEALNRIIAVGH QHHLNVVGWNPGPALSISMGDMPDDGYKTFVCVETAYASETQKVTKEKPAHLAQSIRVAKR >Mature_301_residues MKLKDCVMIKKIFALPVIEQISPVLSRRKLDELDLIVVDHPQVKASFALQGAHLLSWKPAGEEEVLWLSNNTPFKNGVAI RGGVPVCWPWFGPAAQQGLPAHGFARNLPWTLKSHHEDADGVALTFELTQSEETKKFWPHDFTLLAHFRVGKTCEIDLES HGEFETTSALHTYFNVGDIAKVSVSGLGDRFIDKVNDAKENVLTDGIQTFPDRTDRVYLNPQDCSVINDEALNRIIAVGH QHHLNVVGWNPGPALSISMGDMPDDGYKTFVCVETAYASETQKVTKEKPAHLAQSIRVAKR
Specific function: Unknown
COG id: COG0676
COG function: function code G; Uncharacterized enzymes related to aldose 1-epimerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Glucose-6-phosphate 1-epimerase family [H]
Homologues:
Organism=Escherichia coli, GI87081973, Length=294, Percent_Identity=100, Blast_Score=611, Evalue=1e-176, Organism=Saccharomyces cerevisiae, GI6323746, Length=265, Percent_Identity=30.9433962264151, Blast_Score=89, Evalue=8e-19, Organism=Drosophila melanogaster, GI19921284, Length=250, Percent_Identity=29.6, Blast_Score=94, Evalue=2e-19,
Paralogues:
None
Copy number: 560 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008183 - InterPro: IPR011013 - InterPro: IPR014718 [H]
Pfam domain/function: PF01263 Aldose_epim [H]
EC number: =5.1.3.15 [H]
Molecular weight: Translated: 33484; Mature: 33484
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLKDCVMIKKIFALPVIEQISPVLSRRKLDELDLIVVDHPQVKASFALQGAHLLSWKPA CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEECCCEEEEECCC GEEEVLWLSNNTPFKNGVAIRGGVPVCWPWFGPAAQQGLPAHGFARNLPWTLKSHHEDAD CCCEEEEEECCCCCCCCEEEECCCCEEECCCCCHHHCCCCCCCHHCCCCCCCCCCCCCCC GVALTFELTQSEETKKFWPHDFTLLAHFRVGKTCEIDLESHGEFETTSALHTYFNVGDIA CEEEEEEECCCCCCHHCCCCCEEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHCCCCEE KVSVSGLGDRFIDKVNDAKENVLTDGIQTFPDRTDRVYLNPQDCSVINDEALNRIIAVGH EEEHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEECHHHHHHHHHCCC QHHLNVVGWNPGPALSISMGDMPDDGYKTFVCVETAYASETQKVTKEKPAHLAQSIRVAK CCEEEEEEECCCCEEEEECCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHC R C >Mature Secondary Structure MKLKDCVMIKKIFALPVIEQISPVLSRRKLDELDLIVVDHPQVKASFALQGAHLLSWKPA CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEECCCEEEEECCC GEEEVLWLSNNTPFKNGVAIRGGVPVCWPWFGPAAQQGLPAHGFARNLPWTLKSHHEDAD CCCEEEEEECCCCCCCCEEEECCCCEEECCCCCHHHCCCCCCCHHCCCCCCCCCCCCCCC GVALTFELTQSEETKKFWPHDFTLLAHFRVGKTCEIDLESHGEFETTSALHTYFNVGDIA CEEEEEEECCCCCCHHCCCCCEEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHCCCCEE KVSVSGLGDRFIDKVNDAKENVLTDGIQTFPDRTDRVYLNPQDCSVINDEALNRIIAVGH EEEHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEECHHHHHHHHHCCC QHHLNVVGWNPGPALSISMGDMPDDGYKTFVCVETAYASETQKVTKEKPAHLAQSIRVAK CCEEEEEEECCCCEEEEECCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503; 9298646; 10493123 [H]