Click here to switch to the map view.

The map label for this gene is yncJ

Identifier: 157160913

GI number: 157160913

Start: 1529264

End: 1529494

Strand: Reverse

Name: yncJ

Synonym: EcHS_A1520

Alternate gene names: 157160913

Gene position: 1529494-1529264 (Counterclockwise)

Preceding gene: 157160914

Following gene: 157160910

Centisome position: 32.94

GC content: 49.78

Gene sequence:

>231_bases
ATGTTTACGAAGGCGTTATCGGTTGTCTTATTAACGTGTGCGCTGTTCTCAGGACAACTCATGGCAGGGCACAAAGGACA
TGAATTTGTGTGGGTAAAGAATGTGGATCATCAGCTGCGTCATGAAGCGGACAGCGATGAATTGCGTGCTGTGGCGGAAG
AGTCGGCGGAAGGTTTGCGCGAGCATTTTTACTGGCAAAAATCGCGCAAACCAGAAGCGGGACAACGTTGA

Upstream 100 bases:

>100_bases
GAAGATTCCAGAATTTCTTTGCGCTAATTTGCAAAACTGAATAATAACCTCAAGAAACGATCGGCATCATAGCGGCAAAA
GGTAAGAAAAAGGTGGCAGG

Downstream 100 bases:

>100_bases
GTCATTTGTTGCCGGATGCGGCGTGACGCCTTACCCGGCAGGCAATATCATGCAGATTCAATGAGTTGTGAGTAACCAGA
AAACTGGCGTTTTACCCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 76; Mature: 76

Protein sequence:

>76_residues
MFTKALSVVLLTCALFSGQLMAGHKGHEFVWVKNVDHQLRHEADSDELRAVAEESAEGLREHFYWQKSRKPEAGQR

Sequences:

>Translated_76_residues
MFTKALSVVLLTCALFSGQLMAGHKGHEFVWVKNVDHQLRHEADSDELRAVAEESAEGLREHFYWQKSRKPEAGQR
>Mature_76_residues
MFTKALSVVLLTCALFSGQLMAGHKGHEFVWVKNVDHQLRHEADSDELRAVAEESAEGLREHFYWQKSRKPEAGQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787707, Length=76, Percent_Identity=100, Blast_Score=158, Evalue=5e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YNCJ_ECO57 (P64460)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   G85734
- PIR:   H90883
- RefSeq:   NP_287725.1
- RefSeq:   NP_310067.1
- EnsemblBacteria:   EBESCT00000028110
- EnsemblBacteria:   EBESCT00000057123
- GeneID:   917238
- GeneID:   960921
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z2283
- KEGG:   ecs:ECs2040
- GeneTree:   EBGT00050000009735
- HOGENOM:   HBG468702
- OMA:   LLHEADS
- ProtClustDB:   CLSK880070
- BioCyc:   ECOL83334:ECS2040-MONOMER
- InterPro:   IPR020117
- ProDom:   PD057831

Pfam domain/function: PF10829 DUF2554

EC number: NA

Molecular weight: Translated: 8709; Mature: 8709

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTKALSVVLLTCALFSGQLMAGHKGHEFVWVKNVDHQLRHEADSDELRAVAEESAEGLR
CCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHCCCCHHHHHHHHHHHHHHHH
EHFYWQKSRKPEAGQR
HHHHHHCCCCCCCCCC
>Mature Secondary Structure
MFTKALSVVLLTCALFSGQLMAGHKGHEFVWVKNVDHQLRHEADSDELRAVAEESAEGLR
CCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHCCCCHHHHHHHHHHHHHHHH
EHFYWQKSRKPEAGQR
HHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796