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The map label for this gene is ycjY

Identifier: 157160838

GI number: 157160838

Start: 1438384

End: 1439304

Strand: Reverse

Name: ycjY

Synonym: EcHS_A1443

Alternate gene names: 157160838

Gene position: 1439304-1438384 (Counterclockwise)

Preceding gene: 157160840

Following gene: 157160837

Centisome position: 31.0

GC content: 47.99

Gene sequence:

>921_bases
ATGATGAATAATAAAGTCAGCTTCACTAACAGCAATAATCCAACCATCTCTTTGTCTGCAGTGATCTATTTCCCTCCAAA
ATTTGATGAAACCCGTCAGTATCAGGCAATTGTGTTATCTCACCCAGGTGGGGGCGTTAAAGAACAAACGGCCGGAACCT
ATGCCAAAAAACTGGCGGAAAAGGGATTTGTCACTATTGCTTATGACGCATCTTATCAAGGTGAAAGTGGCGGCGAGCCG
CGTCAGTTAGAAAACCCATACATTCGTACTGAAGACATCAGTGCCGTGATTGATTACCTGACAACGCTTTCTTATGTCGA
CAATACCCGAATTGGTGCGATGGGAATTTGTGCCGGTGCAGGATATACAGCCAATGCTGCAATTCAGGATCGCCGCATCA
AGGCCATCGGTACCGTTAGTGCGGTCAATATTGGTTCGATATTCCGTAATGGTTGGGAAAACAATGTGAAATCTATTGAT
GCCCTGCCATACGTTGAAGCGGGTTCAAACGCCAGAACCAGCGATATTAGCAGCGGAGAATACGCCATTATGCCACTGGC
ACCAATGAAGGAGTCCGATGCGCCGAACGAAGAACTGCGTCAGGCCTGGGAGTATTACCACACCCCTCGCGCGCAGTATC
CAACAGCACCGGGTTACGCTACTTTGCGCAGCCTTAACCAGATTATTACCTATGATGCTTACCATATGGCGGAAGTGTAC
CTGACTCAGCCGACGCAGATTGTGGCGGGCAGCCAGGCAGGGAGCAAATGGATGAGTGACGACCTGTACGATCGAGCATC
AAGCCAGGATAAACGCTATCACATTGTTGAAGGCGCAAACCATATGGATCTTTATGACGGCAAAGCCTATGTGGCTGAAG
CAATTTCAGTATTAGCTCCGTTCTTTGAGGAAACTCTGTAA

Upstream 100 bases:

>100_bases
TAGGTCTAATCATGATTTTGGGTCTAATCAACTTAATGATCAATATCTATAGTGATATCACCAACCGTTAAAACGAACCG
ACAACTCCATGAGGAACGGA

Downstream 100 bases:

>100_bases
TGAAACATATTCAAATCCGCAATAGTGATATGGCCTGGCATATTGCTGCCAATAATCTGGGATAATTTTCATGAAAAATG
TACTGATTCTTGGTGCTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MMNNKVSFTNSNNPTISLSAVIYFPPKFDETRQYQAIVLSHPGGGVKEQTAGTYAKKLAEKGFVTIAYDASYQGESGGEP
RQLENPYIRTEDISAVIDYLTTLSYVDNTRIGAMGICAGAGYTANAAIQDRRIKAIGTVSAVNIGSIFRNGWENNVKSID
ALPYVEAGSNARTSDISSGEYAIMPLAPMKESDAPNEELRQAWEYYHTPRAQYPTAPGYATLRSLNQIITYDAYHMAEVY
LTQPTQIVAGSQAGSKWMSDDLYDRASSQDKRYHIVEGANHMDLYDGKAYVAEAISVLAPFFEETL

Sequences:

>Translated_306_residues
MMNNKVSFTNSNNPTISLSAVIYFPPKFDETRQYQAIVLSHPGGGVKEQTAGTYAKKLAEKGFVTIAYDASYQGESGGEP
RQLENPYIRTEDISAVIDYLTTLSYVDNTRIGAMGICAGAGYTANAAIQDRRIKAIGTVSAVNIGSIFRNGWENNVKSID
ALPYVEAGSNARTSDISSGEYAIMPLAPMKESDAPNEELRQAWEYYHTPRAQYPTAPGYATLRSLNQIITYDAYHMAEVY
LTQPTQIVAGSQAGSKWMSDDLYDRASSQDKRYHIVEGANHMDLYDGKAYVAEAISVLAPFFEETL
>Mature_306_residues
MMNNKVSFTNSNNPTISLSAVIYFPPKFDETRQYQAIVLSHPGGGVKEQTAGTYAKKLAEKGFVTIAYDASYQGESGGEP
RQLENPYIRTEDISAVIDYLTTLSYVDNTRIGAMGICAGAGYTANAAIQDRRIKAIGTVSAVNIGSIFRNGWENNVKSID
ALPYVEAGSNARTSDISSGEYAIMPLAPMKESDAPNEELRQAWEYYHTPRAQYPTAPGYATLRSLNQIITYDAYHMAEVY
LTQPTQIVAGSQAGSKWMSDDLYDRASSQDKRYHIVEGANHMDLYDGKAYVAEAISVLAPFFEETL

Specific function: Unknown

COG id: COG1073

COG function: function code R; Hydrolases of the alpha/beta superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI221142683, Length=306, Percent_Identity=100, Blast_Score=634, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YCJY_ECOLI (P76049)

Other databases:

- EMBL:   U00096
- EMBL:   AP009048
- PIR:   B64882
- RefSeq:   AP_001955.1
- RefSeq:   NP_415843.2
- ProteinModelPortal:   P76049
- SMR:   P76049
- DIP:   DIP-11616N
- IntAct:   P76049
- STRING:   P76049
- EnsemblBacteria:   EBESCT00000002746
- EnsemblBacteria:   EBESCT00000017057
- GeneID:   945988
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW5804
- KEGG:   eco:b1327
- EchoBASE:   EB3681
- EcoGene:   EG13922
- eggNOG:   COG1073
- GeneTree:   EBGT00050000010033
- HOGENOM:   HBG683549
- ProtClustDB:   CLSK880104
- BioCyc:   EcoCyc:G6663-MONOMER
- Genevestigator:   P76049
- InterPro:   IPR002925

Pfam domain/function: PF01738 DLH

EC number: NA

Molecular weight: Translated: 33659; Mature: 33659

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNNKVSFTNSNNPTISLSAVIYFPPKFDETRQYQAIVLSHPGGGVKEQTAGTYAKKLAE
CCCCEEEEECCCCCEEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHH
KGFVTIAYDASYQGESGGEPRQLENPYIRTEDISAVIDYLTTLSYVDNTRIGAMGICAGA
CCCEEEEEECCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCEEEEECCC
GYTANAAIQDRRIKAIGTVSAVNIGSIFRNGWENNVKSIDALPYVEAGSNARTSDISSGE
CCCCCCCCCCCEEEEEECEEEEEHHHHHHCCCCCCCHHHCCCCCEECCCCCCCCCCCCCC
YAIMPLAPMKESDAPNEELRQAWEYYHTPRAQYPTAPGYATLRSLNQIITYDAYHMAEVY
EEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCHHEEEEEE
LTQPTQIVAGSQAGSKWMSDDLYDRASSQDKRYHIVEGANHMDLYDGKAYVAEAISVLAP
EECCCEEEECCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCEECCCHHHHHHHHHHHHH
FFEETL
HHHHCC
>Mature Secondary Structure
MMNNKVSFTNSNNPTISLSAVIYFPPKFDETRQYQAIVLSHPGGGVKEQTAGTYAKKLAE
CCCCEEEEECCCCCEEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHH
KGFVTIAYDASYQGESGGEPRQLENPYIRTEDISAVIDYLTTLSYVDNTRIGAMGICAGA
CCCEEEEEECCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCEEEEECCC
GYTANAAIQDRRIKAIGTVSAVNIGSIFRNGWENNVKSIDALPYVEAGSNARTSDISSGE
CCCCCCCCCCCEEEEEECEEEEEHHHHHHCCCCCCCHHHCCCCCEECCCCCCCCCCCCCC
YAIMPLAPMKESDAPNEELRQAWEYYHTPRAQYPTAPGYATLRSLNQIITYDAYHMAEVY
EEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCHHEEEEEE
LTQPTQIVAGSQAGSKWMSDDLYDRASSQDKRYHIVEGANHMDLYDGKAYVAEAISVLAP
EECCCEEEECCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCEECCCHHHHHHHHHHHHH
FFEETL
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503