Definition | Escherichia coli HS, complete genome. |
---|---|
Accession | NC_009800 |
Length | 4,643,538 |
Click here to switch to the map view.
The map label for this gene is osmB
Identifier: 157160791
GI number: 157160791
Start: 1390672
End: 1390890
Strand: Reverse
Name: osmB
Synonym: EcHS_A1395
Alternate gene names: 157160791
Gene position: 1390890-1390672 (Counterclockwise)
Preceding gene: 157160792
Following gene: 157160788
Centisome position: 29.95
GC content: 52.05
Gene sequence:
>219_bases ATGTTTGTAACGAGCAAAAAAATGACCGCGGCTGTTCTGGCAATTACTTTGGCAATGTCTCTGAGTGCCTGTTCTAACTG GTCTAAACGGGACCGCAACACCGCAATCGGCGCGGGTGCAGGGGCATTAGGCGGTGCAGTACTGACCGATGGCAGTACGT TGGGTACATTAGGTGGTGCAGCTGTCGGTGGTGTTATTGGTCACCAGGTCGGTAAATAA
Upstream 100 bases:
>100_bases CGCGAGCAGATTTCACGGAATAATTTCACCAGGCTTATTCTTAGCTATTATAGTTATAGAGAGCTTACTTCCGTGAATCA TAAATTCAGGAGAGAGTATT
Downstream 100 bases:
>100_bases TCGTAAATAAATGTCGATTATCGACTCGCAATTATAATACGCTTGATTCTGTTCAGTACGAAATAACTGAATAATACACA CAGTAAAATATTCGAAAGCC
Product: lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 72; Mature: 72
Protein sequence:
>72_residues MFVTSKKMTAAVLAITLAMSLSACSNWSKRDRNTAIGAGAGALGGAVLTDGSTLGTLGGAAVGGVIGHQVGK
Sequences:
>Translated_72_residues MFVTSKKMTAAVLAITLAMSLSACSNWSKRDRNTAIGAGAGALGGAVLTDGSTLGTLGGAAVGGVIGHQVGK >Mature_72_residues MFVTSKKMTAAVLAITLAMSLSACSNWSKRDRNTAIGAGAGALGGAVLTDGSTLGTLGGAAVGGVIGHQVGK
Specific function: Provides resistance to osmotic stress. May be important for stationary-phase survival
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787539, Length=72, Percent_Identity=100, Blast_Score=137, Evalue=1e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): OSMB_ECO57 (P0ADA9)
Other databases:
- EMBL: AE005174 - EMBL: BA000007 - PIR: F85758 - PIR: H90860 - RefSeq: NP_287914.1 - RefSeq: NP_309883.1 - ProteinModelPortal: P0ADA9 - PRIDE: P0ADA9 - EnsemblBacteria: EBESCT00000028895 - EnsemblBacteria: EBESCT00000056774 - GeneID: 912802 - GeneID: 961375 - GenomeReviews: AE005174_GR - GenomeReviews: BA000007_GR - KEGG: ece:Z2523 - KEGG: ecs:ECs1856 - GeneTree: EBGT00050000011274 - HOGENOM: HBG758658 - OMA: NIDRISK - ProtClustDB: PRK10540 - BioCyc: ECOL83334:ECS1856-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6948; Mature: 6948
Theoretical pI: Translated: 10.79; Mature: 10.79
Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFVTSKKMTAAVLAITLAMSLSACSNWSKRDRNTAIGAGAGALGGAVLTDGSTLGTLGGA CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHH AVGGVIGHQVGK HHHHHHHHCCCC >Mature Secondary Structure MFVTSKKMTAAVLAITLAMSLSACSNWSKRDRNTAIGAGAGALGGAVLTDGSTLGTLGGA CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHH AVGGVIGHQVGK HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796