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The map label for this gene is ompW

Identifier: 157160761

GI number: 157160761

Start: 1361077

End: 1361715

Strand: Direct

Name: ompW

Synonym: EcHS_A1365

Alternate gene names: 157160761

Gene position: 1361077-1361715 (Clockwise)

Preceding gene: 157160757

Following gene: 157160771

Centisome position: 29.31

GC content: 50.08

Gene sequence:

>639_bases
ATGAAAAAGTTAACAGTGGCGGCTTTGGCAGTAACAACTCTTCTCTCTGGCAGTGCCTTTGCGCATGAAGCAGGCGAATT
TTTTATGCGTGCAGGTTCTGCAACCGTACGTCCAACAGAAGGTGCTGGTGGTACGTTAGGAAGTCTGGGTGGATTCAGCG
TGACCAATAACACGCAACTGGGCCTTACGTTTACTTATATGGCGACCGACAACATTGGTGTGGAATTACTGGCAGCGACG
CCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCGTTCATCATCTGCCACCAACACTGATGGCGCA
GTGGTATTTTGGTGATGCCAGCAGCAAATTCCGTCCTTACGTTGGGGCAGGTATTAACTACACCACCTTCTTTGATAATG
GATTTAACGATCATGGCAAAGAGGCAGGGCTTTCCGATCTCAGTCTGAAAGATTCCTGGGGAGCTGCCGGGCAGGTGGGG
GTTGATTATCTGATTAACCGTGACTGGTTGGTTAACATGTCAGTGTGGTACATGGATATCGATACCACCGCCAATTATAA
GCTGGGCGGTGCACAGCAACACGATAGCGTACGCCTCGATCCGTGGGTGTTTATGTTCTCAGCAGGATATCGTTTTTAA

Upstream 100 bases:

>100_bases
AGGGTGAATTATCATATGTAATGTGATCTATGTAGGATCATTTGTTACTCCAATGTAGGTATATTCGTCACGTTTTTATA
ACCATAACGACGGAGCGGAT

Downstream 100 bases:

>100_bases
TTCCGCACAAAAACGACCCCGTAATATACGGGGTCAATAAGGACATGGTATAAAGGGTATTATTTCTTCGCTTCTACGCC
ATCAGTTTCAGAGCGAATTA

Product: outer membrane protein W

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MKKLTVAALAVTTLLSGSAFAHEAGEFFMRAGSATVRPTEGAGGTLGSLGGFSVTNNTQLGLTFTYMATDNIGVELLAAT
PFRHKIGTRATGDIATVHHLPPTLMAQWYFGDASSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSWGAAGQVG
VDYLINRDWLVNMSVWYMDIDTTANYKLGGAQQHDSVRLDPWVFMFSAGYRF

Sequences:

>Translated_212_residues
MKKLTVAALAVTTLLSGSAFAHEAGEFFMRAGSATVRPTEGAGGTLGSLGGFSVTNNTQLGLTFTYMATDNIGVELLAAT
PFRHKIGTRATGDIATVHHLPPTLMAQWYFGDASSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSWGAAGQVG
VDYLINRDWLVNMSVWYMDIDTTANYKLGGAQQHDSVRLDPWVFMFSAGYRF
>Mature_212_residues
MKKLTVAALAVTTLLSGSAFAHEAGEFFMRAGSATVRPTEGAGGTLGSLGGFSVTNNTQLGLTFTYMATDNIGVELLAAT
PFRHKIGTRATGDIATVHHLPPTLMAQWYFGDASSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSWGAAGQVG
VDYLINRDWLVNMSVWYMDIDTTANYKLGGAQQHDSVRLDPWVFMFSAGYRF

Specific function: Acts as a receptor for colicin S4

COG id: COG3047

COG function: function code M; Outer membrane protein W

Gene ontology:

Cell location: Cell outer membrane

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OmpW/AlkL family

Homologues:

Organism=Escherichia coli, GI1787510, Length=212, Percent_Identity=100, Blast_Score=434, Evalue=1e-123,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): OMPW_ECOLI (P0A915)

Other databases:

- EMBL:   X13583
- EMBL:   U00096
- EMBL:   AP009048
- EMBL:   U24195
- EMBL:   U24196
- EMBL:   U24197
- EMBL:   U24198
- EMBL:   U24199
- EMBL:   U24200
- EMBL:   U24201
- EMBL:   U24202
- EMBL:   U24203
- EMBL:   U24204
- EMBL:   U24205
- EMBL:   U24206
- PIR:   S07797
- PIR:   T45501
- RefSeq:   AP_001882.1
- RefSeq:   NP_415772.1
- PDB:   2F1T
- PDB:   2F1V
- PDBsum:   2F1T
- PDBsum:   2F1V
- ProteinModelPortal:   P0A915
- SMR:   P0A915
- IntAct:   P0A915
- STRING:   P0A915
- PRIDE:   P0A915
- EnsemblBacteria:   EBESCT00000002879
- EnsemblBacteria:   EBESCT00000014466
- GeneID:   945128
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW1248
- KEGG:   eco:b1256
- EchoBASE:   EB1114
- EcoGene:   EG11124
- eggNOG:   COG3047
- GeneTree:   EBGT00050000009541
- HOGENOM:   HBG701154
- OMA:   MAQYYFG
- ProtClustDB:   PRK10959
- BioCyc:   EcoCyc:EG11124-MONOMER
- Genevestigator:   P0A915
- InterPro:   IPR011250
- InterPro:   IPR005618
- Gene3D:   G3DSA:2.40.160.20

Pfam domain/function: PF03922 OmpW

EC number: NA

Molecular weight: Translated: 22928; Mature: 22928

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLTVAALAVTTLLSGSAFAHEAGEFFMRAGSATVRPTEGAGGTLGSLGGFSVTNNTQL
CCCCHHHHHHHHHHHCCCCHHHHHHHHHEECCCCEECCCCCCCCCCCCCCCEEECCCCEE
GLTFTYMATDNIGVELLAATPFRHKIGTRATGDIATVHHLPPTLMAQWYFGDASSKFRPY
EEEEEEEEECCCCEEEEEECCHHHHCCCCCCCCEEEEECCCHHHEEEEEECCCCCCCCCE
VGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSWGAAGQVGVDYLINRDWLVNMSVWYMDI
ECCCCEEEEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCEEEEECCCEEEEEEEEEEEE
DTTANYKLGGAQQHDSVRLDPWVFMFSAGYRF
CCCCCEEECCCCCCCCEEECCEEEEEECCCCC
>Mature Secondary Structure
MKKLTVAALAVTTLLSGSAFAHEAGEFFMRAGSATVRPTEGAGGTLGSLGGFSVTNNTQL
CCCCHHHHHHHHHHHCCCCHHHHHHHHHEECCCCEECCCCCCCCCCCCCCCEEECCCCEE
GLTFTYMATDNIGVELLAATPFRHKIGTRATGDIATVHHLPPTLMAQWYFGDASSKFRPY
EEEEEEEEECCCCEEEEEECCHHHHCCCCCCCCEEEEECCCHHHEEEEEECCCCCCCCCE
VGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSWGAAGQVGVDYLINRDWLVNMSVWYMDI
ECCCCEEEEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCEEEEECCCEEEEEEEEEEEE
DTTANYKLGGAQQHDSVRLDPWVFMFSAGYRF
CCCCCEEECCCCCCCCEEECCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3058546; 9097039; 9278503; 9629924; 10348872