Click here to switch to the map view.

The map label for this gene is yuaQ [H]

Identifier: 157160671

GI number: 157160671

Start: 1268050

End: 1269570

Strand: Direct

Name: yuaQ [H]

Synonym: EcHS_A1267

Alternate gene names: 157160671

Gene position: 1268050-1269570 (Clockwise)

Preceding gene: 157160670

Following gene: 157160675

Centisome position: 27.31

GC content: 38.4

Gene sequence:

>1521_bases
ATGAAACTGAAAAAACTCTCCGGGTTTAGTTTGGGACTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTT
GGATGATTATAGTATAATTTCCTATATGACTGATGAAGAATCGCCGATTGAAATCAAAGATAATAATCCGATAAGTAATG
GAGAGTATCTAACCACTGAAGACGAAAGCCATGCTGTGAAAGTGGATGACGGTGTAACTGGATATATAAATAATGCCAGT
GTGATGACTAGTGGTGATGGATCTTATGGTATTTCTGTTGATAGTCAAAACAAAGTATTATATATAAGCGATAGCGATAT
TAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCACCA
TCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCGGGACTTTTAAGCCAGGTTAATGATTCTGAA
AAGATGGTAAATAACACCCGTCTTGAAACCACAGATAAAACGAACATTGTTACCTCTGGGGAAAATGCAGTAGGTGTTCT
TGCATGTTCAAGTCCTGGAGAGTCTCGAACATGTGTCGATGCTGTAGATGATGAAGTTAGTGATTCTAACAGTTACGAAG
TTATTAGCCGTGCTGATTTAAAAATGAATGGTGGTTCCATAACAACTAATGGCATTAATAGCTATGGTGCTTATGCTAAT
GGGAAAAAAGCATATATTAATTTAGATTATGTGGCACTTGAAACTGTGGCTGATGGAAGTTATGCAGTTGCTATTCGACA
AGGTAACATTGATATAAAAAATAGTTCTATTACAACAACAGGCACTAAAGCCCCCATTGCAAAAATATACAATGGTGGAG
AGTTATTTTTTTCCAATGTCACCGCGGTATCAAAACAAGATAAAGGAATATCAATTGATGCATCAAATATCGATTCTCAA
GCCAAAATAGCACTATTAAGTGTTGAACTTTCAAGTGCTTTGGATAGTATTGATGTTAACAAAACTACAACGGATGTAAG
TATCCTTAATCGAAGTATTATCACACCTGGTAATAATGTTCTGGTTAATAATACTGGAGGTGACTTAAACATAATTTCGT
CCGACTCTATTCTAAATGGAGCGACTAAACTCGTCAGCGGCACAACCACGCTGAAGCTTTCAGAAAATACAATCTGGAAT
ATGAAAGATGACTCCGTTGTTACCCATCTGACTAATTCAGACAGTATTATCAATCTTTCGTATGATGATGGTCAAACATT
TACCCAAGGAAAAACATTAACCGTAAAAGGTAATTATGTCGGTAATAATGGTCAGCTTAATATCCGCACCGTATTAGGTG
ATGATAAATCGGCTACGGACAGACTTATTGTTGAGGGTAATACTTCGGGTTCAACTACCGTCTATGTGAAAAATGCTGGA
GGAAGCGGCGCGGCCACGCTAAACGGGATCGAACTCATAACTGTGAATGGCGATGAATCTCCAGCAGATGCCTTCAGATA
A

Upstream 100 bases:

>100_bases
TGTGCTTTTGTTTTTGTCTTTACCCTCCGTTTTGGTAATCTGAGCTCATAGGTTATTTGACCAGGAATGTTTGTTAATCC
AATGAATGGATGGTTAATCT

Downstream 100 bases:

>100_bases
GGTGATGCAAGGATTGCAGCTGGAGCTTTCGAATATCAACTAAAACAACAAGGCAAAAACTGGTATTTGACAAGTTATCA
GTCAGTGAATGAGGAGGATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 506; Mature: 506

Protein sequence:

>506_residues
MKLKKLSGFSLGLIALAVGNAYATQLLDDYSIISYMTDEESPIEIKDNNPISNGEYLTTEDESHAVKVDDGVTGYINNAS
VMTSGDGSYGISVDSQNKVLYISDSDIKTSGSVSDKENGGITASAVVSEFGGTIFMNGDNSVESGGAYSAGLLSQVNDSE
KMVNNTRLETTDKTNIVTSGENAVGVLACSSPGESRTCVDAVDDEVSDSNSYEVISRADLKMNGGSITTNGINSYGAYAN
GKKAYINLDYVALETVADGSYAVAIRQGNIDIKNSSITTTGTKAPIAKIYNGGELFFSNVTAVSKQDKGISIDASNIDSQ
AKIALLSVELSSALDSIDVNKTTTDVSILNRSIITPGNNVLVNNTGGDLNIISSDSILNGATKLVSGTTTLKLSENTIWN
MKDDSVVTHLTNSDSIINLSYDDGQTFTQGKTLTVKGNYVGNNGQLNIRTVLGDDKSATDRLIVEGNTSGSTTVYVKNAG
GSGAATLNGIELITVNGDESPADAFR

Sequences:

>Translated_506_residues
MKLKKLSGFSLGLIALAVGNAYATQLLDDYSIISYMTDEESPIEIKDNNPISNGEYLTTEDESHAVKVDDGVTGYINNAS
VMTSGDGSYGISVDSQNKVLYISDSDIKTSGSVSDKENGGITASAVVSEFGGTIFMNGDNSVESGGAYSAGLLSQVNDSE
KMVNNTRLETTDKTNIVTSGENAVGVLACSSPGESRTCVDAVDDEVSDSNSYEVISRADLKMNGGSITTNGINSYGAYAN
GKKAYINLDYVALETVADGSYAVAIRQGNIDIKNSSITTTGTKAPIAKIYNGGELFFSNVTAVSKQDKGISIDASNIDSQ
AKIALLSVELSSALDSIDVNKTTTDVSILNRSIITPGNNVLVNNTGGDLNIISSDSILNGATKLVSGTTTLKLSENTIWN
MKDDSVVTHLTNSDSIINLSYDDGQTFTQGKTLTVKGNYVGNNGQLNIRTVLGDDKSATDRLIVEGNTSGSTTVYVKNAG
GSGAATLNGIELITVNGDESPADAFR
>Mature_506_residues
MKLKKLSGFSLGLIALAVGNAYATQLLDDYSIISYMTDEESPIEIKDNNPISNGEYLTTEDESHAVKVDDGVTGYINNAS
VMTSGDGSYGISVDSQNKVLYISDSDIKTSGSVSDKENGGITASAVVSEFGGTIFMNGDNSVESGGAYSAGLLSQVNDSE
KMVNNTRLETTDKTNIVTSGENAVGVLACSSPGESRTCVDAVDDEVSDSNSYEVISRADLKMNGGSITTNGINSYGAYAN
GKKAYINLDYVALETVADGSYAVAIRQGNIDIKNSSITTTGTKAPIAKIYNGGELFFSNVTAVSKQDKGISIDASNIDSQ
AKIALLSVELSSALDSIDVNKTTTDVSILNRSIITPGNNVLVNNTGGDLNIISSDSILNGATKLVSGTTTLKLSENTIWN
MKDDSVVTHLTNSDSIINLSYDDGQTFTQGKTLTVKGNYVGNNGQLNIRTVLGDDKSATDRLIVEGNTSGSTTVYVKNAG
GSGAATLNGIELITVNGDESPADAFR

Specific function: Unknown

COG id: COG3468

COG function: function code MU; Type V secretory pathway, adhesin AidA

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 autotransporter (TC 1.B.12) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005546
- InterPro:   IPR013425
- InterPro:   IPR006315
- InterPro:   IPR012332
- InterPro:   IPR011050
- InterPro:   IPR004899 [H]

Pfam domain/function: PF03797 Autotransporter; PF03212 Pertactin [H]

EC number: NA

Molecular weight: Translated: 52894; Mature: 52894

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKKLSGFSLGLIALAVGNAYATQLLDDYSIISYMTDEESPIEIKDNNPISNGEYLTTE
CCCCCCCCCCEEEEEEECCCHHHHHHHCCCEEEEEECCCCCCEEEECCCCCCCCCEEEEC
DESHAVKVDDGVTGYINNASVMTSGDGSYGISVDSQNKVLYISDSDIKTSGSVSDKENGG
CCCCEEEECCCEEEEECCCEEEECCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCC
ITASAVVSEFGGTIFMNGDNSVESGGAYSAGLLSQVNDSEKMVNNTRLETTDKTNIVTSG
EEHHHHHHHHCCEEEECCCCCCCCCCCCCHHHHHHCCCCHHHHCCCEEEECCCCEEEECC
ENAVGVLACSSPGESRTCVDAVDDEVSDSNSYEVISRADLKMNGGSITTNGINSYGAYAN
CCEEEEEEECCCCCCCEEHHHCCCCCCCCCCEEEEEEEEEEECCCEEEECCCCCCCCCCC
GKKAYINLDYVALETVADGSYAVAIRQGNIDIKNSSITTTGTKAPIAKIYNGGELFFSNV
CCEEEEEEEEEEEEEECCCCEEEEEEECCEEEECCEEEECCCCCCEEEEECCCEEEEECE
TAVSKQDKGISIDASNIDSQAKIALLSVELSSALDSIDVNKTTTDVSILNRSIITPGNNV
EEECCCCCCEEEECCCCCCCEEEEEEEEEHHHHHCCCCCCCCCCCHHHHCCEEECCCCCE
LVNNTGGDLNIISSDSILNGATKLVSGTTTLKLSENTIWNMKDDSVVTHLTNSDSIINLS
EEECCCCCEEEEECCCCCCCCHHHCCCCEEEEEECCEEEECCCCCEEEEEECCCCEEEEE
YDDGQTFTQGKTLTVKGNYVGNNGQLNIRTVLGDDKSATDRLIVEGNTSGSTTVYVKNAG
ECCCCEEECCCEEEEECCEECCCCCEEEEEEECCCCCCCCEEEEECCCCCCEEEEEECCC
GSGAATLNGIELITVNGDESPADAFR
CCCCEEECCEEEEEECCCCCCHHHCC
>Mature Secondary Structure
MKLKKLSGFSLGLIALAVGNAYATQLLDDYSIISYMTDEESPIEIKDNNPISNGEYLTTE
CCCCCCCCCCEEEEEEECCCHHHHHHHCCCEEEEEECCCCCCEEEECCCCCCCCCEEEEC
DESHAVKVDDGVTGYINNASVMTSGDGSYGISVDSQNKVLYISDSDIKTSGSVSDKENGG
CCCCEEEECCCEEEEECCCEEEECCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCC
ITASAVVSEFGGTIFMNGDNSVESGGAYSAGLLSQVNDSEKMVNNTRLETTDKTNIVTSG
EEHHHHHHHHCCEEEECCCCCCCCCCCCCHHHHHHCCCCHHHHCCCEEEECCCCEEEECC
ENAVGVLACSSPGESRTCVDAVDDEVSDSNSYEVISRADLKMNGGSITTNGINSYGAYAN
CCEEEEEEECCCCCCCEEHHHCCCCCCCCCCEEEEEEEEEEECCCEEEECCCCCCCCCCC
GKKAYINLDYVALETVADGSYAVAIRQGNIDIKNSSITTTGTKAPIAKIYNGGELFFSNV
CCEEEEEEEEEEEEEECCCCEEEEEEECCEEEECCEEEECCCCCCEEEEECCCEEEEECE
TAVSKQDKGISIDASNIDSQAKIALLSVELSSALDSIDVNKTTTDVSILNRSIITPGNNV
EEECCCCCCEEEECCCCCCCEEEEEEEEEHHHHHCCCCCCCCCCCHHHHCCEEECCCCCE
LVNNTGGDLNIISSDSILNGATKLVSGTTTLKLSENTIWNMKDDSVVTHLTNSDSIINLS
EEECCCCCEEEEECCCCCCCCHHHCCCCEEEEEECCEEEECCCCCEEEEEECCCCEEEEE
YDDGQTFTQGKTLTVKGNYVGNNGQLNIRTVLGDDKSATDRLIVEGNTSGSTTVYVKNAG
ECCCCEEECCCEEEEECCEECCCCCEEEEEEECCCCCCCCEEEEECCCCCCEEEEEECCC
GSGAATLNGIELITVNGDESPADAFR
CCCCEEECCEEEEEECCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA