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The map label for this gene is ariR

Identifier: 157160666

GI number: 157160666

Start: 1264818

End: 1265084

Strand: Direct

Name: ariR

Synonym: EcHS_A1262

Alternate gene names: 157160666

Gene position: 1264818-1265084 (Clockwise)

Preceding gene: 157160660

Following gene: 157160667

Centisome position: 27.24

GC content: 35.58

Gene sequence:

>267_bases
ATGCTTGAAGATACTACAATTCATAATGCAATAACTGATAAAGCGTTAGCAAGTTACTTTCGCAGTTCGGGTAATTTGTT
AGAAGAAGAGTCAGCAGTGTTAGGGCAGGCTGTCACCAATTTAATGCTTTCAGGCGATAATGTTAATAATAAAAATATTA
TCTTAAGTCTGATACACTCCCTGGAAACAACAAGTGATATTCTCAAAGCTGATGTGATTAGAAAAACACTGGAAATCGTG
TTGCGATACACAGCTGATGATATGTAA

Upstream 100 bases:

>100_bases
CCAAACCGAAGAACAGCGACAGCTGACAATAAAAGTATGTTCAATGGTTGGAAAATAAACAGAATACATTAAAATTTCAT
AAGTAAGATGAGAGGTTACC

Downstream 100 bases:

>100_bases
CTTCTAATTATTAAGTATAAGTTTATAGAAAACTCATTCATCTTATTTTTGTCTGTCGCTTTAGACTATACACAGCATAA
TTTTATTAGGTTAATATTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MLEDTTIHNAITDKALASYFRSSGNLLEEESAVLGQAVTNLMLSGDNVNNKNIILSLIHSLETTSDILKADVIRKTLEIV
LRYTADDM

Sequences:

>Translated_88_residues
MLEDTTIHNAITDKALASYFRSSGNLLEEESAVLGQAVTNLMLSGDNVNNKNIILSLIHSLETTSDILKADVIRKTLEIV
LRYTADDM
>Mature_88_residues
MLEDTTIHNAITDKALASYFRSSGNLLEEESAVLGQAVTNLMLSGDNVNNKNIILSLIHSLETTSDILKADVIRKTLEIV
LRYTADDM

Specific function: Regulates expression of genes involved in acid- resistance and biofilm formation. May be a non-specific DNA- binding protein that binds genes and/or intergenic regions via a geometric recognition

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AriR family

Homologues:

Organism=Escherichia coli, GI1787413, Length=88, Percent_Identity=100, Blast_Score=174, Evalue=1e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ARIR_ECO24 (A7ZKT2)

Other databases:

- EMBL:   CP000800
- RefSeq:   YP_001462411.1
- ProteinModelPortal:   A7ZKT2
- SMR:   A7ZKT2
- STRING:   A7ZKT2
- EnsemblBacteria:   EBESCT00000020992
- GeneID:   5587007
- GenomeReviews:   CP000800_GR
- KEGG:   ecw:EcE24377A_1305
- eggNOG:   NOG150175
- GeneTree:   EBGT00050000011185
- HOGENOM:   HBG469138
- OMA:   DESAVMS
- ProtClustDB:   CLSK891735
- BioCyc:   ECOL331111:ECE24377A_1305-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9694; Mature: 9694

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEDTTIHNAITDKALASYFRSSGNLLEEESAVLGQAVTNLMLSGDNVNNKNIILSLIHS
CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
LETTSDILKADVIRKTLEIVLRYTADDM
HHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLEDTTIHNAITDKALASYFRSSGNLLEEESAVLGQAVTNLMLSGDNVNNKNIILSLIHS
CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
LETTSDILKADVIRKTLEIVLRYTADDM
HHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA