Definition | Escherichia coli HS, complete genome. |
---|---|
Accession | NC_009800 |
Length | 4,643,538 |
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The map label for this gene is fhuE [H]
Identifier: 157160628
GI number: 157160628
Start: 1223042
End: 1225231
Strand: Reverse
Name: fhuE [H]
Synonym: EcHS_A1224
Alternate gene names: 157160628
Gene position: 1225231-1223042 (Counterclockwise)
Preceding gene: 157160629
Following gene: 157160613
Centisome position: 26.39
GC content: 49.86
Gene sequence:
>2190_bases ATGCTTTCAACACAATTTAACAGGGATAATCAATATCAAGCCATCACCAAACCGTCACTACTTGCCGGTTGCATAGCACT GGCACTATTACCTTCTGCCGCTTTTGCTGCACCAGCCACTGAAGAAACGGTGATTGTTGAGGGTTCAGCCACAGCTCCAG ATGATGGCGAAAATGATTACAGCGTAACGTCTACCTCTGCGGGTACCAAAATGCAGATGACTCAACGTGATATTCCTCAG TCGGTCACTATTGTTAGCCAGCAGCGGATGGAAGATCAGCAGTTACAAACGCTGGGCGAAGTGATGGAAAACACGCTGGG GATCAGCAAAAGTCAGGCGGATTCCGATCGTGCTCTTTATTATTCCCGCGGATTCCAGATCGATAACTATATGGTTGATG GTATCCCCACCTATTTTGAATCGCGCTGGAATCTGGGCGACGCACTTTCTGATATGGCACTCTTTGAACGCGTAGAAGTA GTGCGTGGCGCGACAGGACTCATGACCGGGACGGGTAATCCATCTGCGGCAATTAATATGGTTCGAAAACACGCGACCAG TCGTGAATTTAAAGGCGATGTCTCGGCGGAATACGGTAGCTGGAACAAAGAACGGTATGTGGCGGATTTACAAAGCCCAC TCACCGAAGACGGTAAAATCCGCGCGCGAATTGTCGGCGGCTACCAGAATAACGACTCATGGCTGGACCGCTACAACAGT GAAAAGACCTTCTTCTCGGGCATTGTCGATGCTGATTTAGGCGATCTTACGACGCTTTCAGCCGGTTACGAATATCAGCG CATTGATGTTAATAGCCCTACCTGGGGCGGTTTACCGCGCTGGAATACTGATGGCAGCAGCAACAGTTACGATCGTGCAC GCAGTACCGCACCTGACTGGGCGTACAACGATAAAGAGATCAACAAGGTCTTTATGACCCTGAAGCAGCGGTTTGCTGAT ACCTGGCAAGCGACACTGAATGCCACCCACTCTGAAGTCGAATTTGACAGCAAAATGATGTATGTCGATGCCTATGTAAA CAAAGCGGATGGTATGCTGGTTGGGCCATACAGTAATTATGGACCTGGCTTTGATTATGTCGGCGGCACCGGTTGGAACA GTGGCAAACGTAAAGTTGATGCGCTGGATTTGTTCGCTGACGGTATTTATGAATTGTTTGGTCGTCAGCACAATCTAATG TTTGGTGGCAGTTACAGCAAACAAAACAATCGTTACTTCAGTTCATGGGCCAACATCTTCCCGGATGAAATTGGCAGTTT CTACAACTTTAATGGCAATTTCCCACAAACCGACTGGTCACCACAGAGCCTGGCACAGGACGATACCACACATATGAAAT CGTTATATGCTGCCACTCGAGTCACCCTTGCCGATCCGCTGCATCTGATCCTCGGCGCACGTTATACCAACTGGCGGGTT GATACGCTGACTTACAGCATGGAGAAAAACCACACCACGCCTTACGCTGGTCTGGTGTTTGACATCAATGACAACTGGTC GACCTACGCCAGCTATACCTCTATTTTCCAGCCGCAAAATGATCGTGACAGTTCAGGCAAATATCTGGCTCCAATCACCG GTAACAACTACGAGCTGGGTCTGAAATCGGACTGGATGAATAGCCGTCTGACCACCACGTTAGCCATCTTCCGTATTGAG CAGGATAATGTCGCTCAGTCCACCGGTACACCTATCCCCGGCAGCAACGGCGAAACCGCCTATAAAGCGGTGGATGGGAC AGTCAGTAAAGGGGTGGAATTTGAACTCAACGGCGCAATTACCGACAACTGGCAGCTGACATTTGGCGCAACGCGCTATA TTGCAGAGGATAACGAAGGAAACGCCGTTAATCCTAATCTGCCACGCACCACGGTTAAAATGTTCACCAGCTATCGGTTG CCTGTCATGCCAGAGTTGACAGTCGGCGGTGGTGTTAACTGGCAAAATCGCGTGTATACCGACACCGTGACACCGTATGG CACCTTCCGCGCCGAGCAAGGTAGCTACGCGCTGGTGGATCTCTTCACCCGCTACCAGGTGACGAAAAACTTCTCGTTAC AGGGGAACGTCAATAACCTGTTCGACAAAACCTACGATACCAACGTGGAAGGTTCTATCGTCTACGGCGCACCGCGTAAT TTCAGCATTACCGGCACGTATCAATTCTGA
Upstream 100 bases:
>100_bases CATTTGCATTTACAAACAAAATTATTCGCACACTAAATATAACCGCTCATCACCCTCCTCCGGCATGAGCCTGACGACAA CATAAACCAAGAGATTTCAA
Downstream 100 bases:
>100_bases ATAACACCTGTAAAAAAGGCAGCCATCTGGCTGCCTTAGTCTCCCCAACGTCTTACAGATTAGTGGTTACGGATGTACTC ATCCATCTCGGTTTTCAGGT
Product: ferric-rhodotorulic acid outer membrane transporter
Products: NA
Alternate protein names: Outer-membrane receptor for Fe(III)-coprogen, Fe(III)-ferrioxamine B and Fe(III)-rhodotrulic acid [H]
Number of amino acids: Translated: 729; Mature: 729
Protein sequence:
>729_residues MLSTQFNRDNQYQAITKPSLLAGCIALALLPSAAFAAPATEETVIVEGSATAPDDGENDYSVTSTSAGTKMQMTQRDIPQ SVTIVSQQRMEDQQLQTLGEVMENTLGISKSQADSDRALYYSRGFQIDNYMVDGIPTYFESRWNLGDALSDMALFERVEV VRGATGLMTGTGNPSAAINMVRKHATSREFKGDVSAEYGSWNKERYVADLQSPLTEDGKIRARIVGGYQNNDSWLDRYNS EKTFFSGIVDADLGDLTTLSAGYEYQRIDVNSPTWGGLPRWNTDGSSNSYDRARSTAPDWAYNDKEINKVFMTLKQRFAD TWQATLNATHSEVEFDSKMMYVDAYVNKADGMLVGPYSNYGPGFDYVGGTGWNSGKRKVDALDLFADGIYELFGRQHNLM FGGSYSKQNNRYFSSWANIFPDEIGSFYNFNGNFPQTDWSPQSLAQDDTTHMKSLYAATRVTLADPLHLILGARYTNWRV DTLTYSMEKNHTTPYAGLVFDINDNWSTYASYTSIFQPQNDRDSSGKYLAPITGNNYELGLKSDWMNSRLTTTLAIFRIE QDNVAQSTGTPIPGSNGETAYKAVDGTVSKGVEFELNGAITDNWQLTFGATRYIAEDNEGNAVNPNLPRTTVKMFTSYRL PVMPELTVGGGVNWQNRVYTDTVTPYGTFRAEQGSYALVDLFTRYQVTKNFSLQGNVNNLFDKTYDTNVEGSIVYGAPRN FSITGTYQF
Sequences:
>Translated_729_residues MLSTQFNRDNQYQAITKPSLLAGCIALALLPSAAFAAPATEETVIVEGSATAPDDGENDYSVTSTSAGTKMQMTQRDIPQ SVTIVSQQRMEDQQLQTLGEVMENTLGISKSQADSDRALYYSRGFQIDNYMVDGIPTYFESRWNLGDALSDMALFERVEV VRGATGLMTGTGNPSAAINMVRKHATSREFKGDVSAEYGSWNKERYVADLQSPLTEDGKIRARIVGGYQNNDSWLDRYNS EKTFFSGIVDADLGDLTTLSAGYEYQRIDVNSPTWGGLPRWNTDGSSNSYDRARSTAPDWAYNDKEINKVFMTLKQRFAD TWQATLNATHSEVEFDSKMMYVDAYVNKADGMLVGPYSNYGPGFDYVGGTGWNSGKRKVDALDLFADGIYELFGRQHNLM FGGSYSKQNNRYFSSWANIFPDEIGSFYNFNGNFPQTDWSPQSLAQDDTTHMKSLYAATRVTLADPLHLILGARYTNWRV DTLTYSMEKNHTTPYAGLVFDINDNWSTYASYTSIFQPQNDRDSSGKYLAPITGNNYELGLKSDWMNSRLTTTLAIFRIE QDNVAQSTGTPIPGSNGETAYKAVDGTVSKGVEFELNGAITDNWQLTFGATRYIAEDNEGNAVNPNLPRTTVKMFTSYRL PVMPELTVGGGVNWQNRVYTDTVTPYGTFRAEQGSYALVDLFTRYQVTKNFSLQGNVNNLFDKTYDTNVEGSIVYGAPRN FSITGTYQF >Mature_729_residues MLSTQFNRDNQYQAITKPSLLAGCIALALLPSAAFAAPATEETVIVEGSATAPDDGENDYSVTSTSAGTKMQMTQRDIPQ SVTIVSQQRMEDQQLQTLGEVMENTLGISKSQADSDRALYYSRGFQIDNYMVDGIPTYFESRWNLGDALSDMALFERVEV VRGATGLMTGTGNPSAAINMVRKHATSREFKGDVSAEYGSWNKERYVADLQSPLTEDGKIRARIVGGYQNNDSWLDRYNS EKTFFSGIVDADLGDLTTLSAGYEYQRIDVNSPTWGGLPRWNTDGSSNSYDRARSTAPDWAYNDKEINKVFMTLKQRFAD TWQATLNATHSEVEFDSKMMYVDAYVNKADGMLVGPYSNYGPGFDYVGGTGWNSGKRKVDALDLFADGIYELFGRQHNLM FGGSYSKQNNRYFSSWANIFPDEIGSFYNFNGNFPQTDWSPQSLAQDDTTHMKSLYAATRVTLADPLHLILGARYTNWRV DTLTYSMEKNHTTPYAGLVFDINDNWSTYASYTSIFQPQNDRDSSGKYLAPITGNNYELGLKSDWMNSRLTTTLAIFRIE QDNVAQSTGTPIPGSNGETAYKAVDGTVSKGVEFELNGAITDNWQLTFGATRYIAEDNEGNAVNPNLPRTTVKMFTSYRL PVMPELTVGGGVNWQNRVYTDTVTPYGTFRAEQGSYALVDLFTRYQVTKNFSLQGNVNNLFDKTYDTNVEGSIVYGAPRN FSITGTYQF
Specific function: Required for the uptake of Fe(3+) via coprogen, ferrioxamine B, and rhodotorulic acid [H]
COG id: COG4773
COG function: function code P; Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1787344, Length=729, Percent_Identity=99.5884773662551, Blast_Score=1497, Evalue=0.0, Organism=Escherichia coli, GI1786344, Length=288, Percent_Identity=24.6527777777778, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 81257; Mature: 81257
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: PS00430 TONB_DEPENDENT_REC_1 ; PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSTQFNRDNQYQAITKPSLLAGCIALALLPSAAFAAPATEETVIVEGSATAPDDGENDY CCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCHHHCCCCCCCEEEEECCCCCCCCCCCCC SVTSTSAGTKMQMTQRDIPQSVTIVSQQRMEDQQLQTLGEVMENTLGISKSQADSDRALY EEEECCCCCEEEEHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE YSRGFQIDNYMVDGIPTYFESRWNLGDALSDMALFERVEVVRGATGLMTGTGNPSAAINM EECCEEECCEEECCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHH VRKHATSREFKGDVSAEYGSWNKERYVADLQSPLTEDGKIRARIVGGYQNNDSWLDRYNS HHHHCCCHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHCCC EKTFFSGIVDADLGDLTTLSAGYEYQRIDVNSPTWGGLPRWNTDGSSNSYDRARSTAPDW CHHHHHHHHCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCC AYNDKEINKVFMTLKQRFADTWQATLNATHSEVEFDSKMMYVDAYVNKADGMLVGPYSNY CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCEEEEEEEEECCCCCEEECCCCCC GPGFDYVGGTGWNSGKRKVDALDLFADGIYELFGRQHNLMFGGSYSKQNNRYFSSWANIF CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHCC PDEIGSFYNFNGNFPQTDWSPQSLAQDDTTHMKSLYAATRVTLADPLHLILGARYTNWRV HHHHCCEEECCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCEEE DTLTYSMEKNHTTPYAGLVFDINDNWSTYASYTSIFQPQNDRDSSGKYLAPITGNNYELG EEEEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEC LKSDWMNSRLTTTLAIFRIEQDNVAQSTGTPIPGSNGETAYKAVDGTVSKGVEFELNGAI CCCCCCCCHHEEEEEEEEECCCCCHHHCCCCCCCCCCCEEEEEECCHHHCCEEEEECCEE TDNWQLTFGATRYIAEDNEGNAVNPNLPRTTVKMFTSYRLPVMPELTVGGGVNWQNRVYT ECCEEEEECEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEECCCCCCCCEEEE DTVTPYGTFRAEQGSYALVDLFTRYQVTKNFSLQGNVNNLFDKTYDTNVEGSIVYGAPRN CCCCCCCCEECCCCCEEHHHHHHHHHEEECEEECCCHHHHHCCCCCCCCCCEEEECCCCC FSITGTYQF EEEEEEECC >Mature Secondary Structure MLSTQFNRDNQYQAITKPSLLAGCIALALLPSAAFAAPATEETVIVEGSATAPDDGENDY CCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCHHHCCCCCCCEEEEECCCCCCCCCCCCC SVTSTSAGTKMQMTQRDIPQSVTIVSQQRMEDQQLQTLGEVMENTLGISKSQADSDRALY EEEECCCCCEEEEHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE YSRGFQIDNYMVDGIPTYFESRWNLGDALSDMALFERVEVVRGATGLMTGTGNPSAAINM EECCEEECCEEECCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHH VRKHATSREFKGDVSAEYGSWNKERYVADLQSPLTEDGKIRARIVGGYQNNDSWLDRYNS HHHHCCCHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHCCC EKTFFSGIVDADLGDLTTLSAGYEYQRIDVNSPTWGGLPRWNTDGSSNSYDRARSTAPDW CHHHHHHHHCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCC AYNDKEINKVFMTLKQRFADTWQATLNATHSEVEFDSKMMYVDAYVNKADGMLVGPYSNY CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCEEEEEEEEECCCCCEEECCCCCC GPGFDYVGGTGWNSGKRKVDALDLFADGIYELFGRQHNLMFGGSYSKQNNRYFSSWANIF CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHCC PDEIGSFYNFNGNFPQTDWSPQSLAQDDTTHMKSLYAATRVTLADPLHLILGARYTNWRV HHHHCCEEECCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCEEE DTLTYSMEKNHTTPYAGLVFDINDNWSTYASYTSIFQPQNDRDSSGKYLAPITGNNYELG EEEEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEC LKSDWMNSRLTTTLAIFRIEQDNVAQSTGTPIPGSNGETAYKAVDGTVSKGVEFELNGAI CCCCCCCCHHEEEEEEEEECCCCCHHHCCCCCCCCCCCEEEEEECCHHHCCEEEEECCEE TDNWQLTFGATRYIAEDNEGNAVNPNLPRTTVKMFTSYRLPVMPELTVGGGVNWQNRVYT ECCEEEEECEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEECCCCCCCCEEEE DTVTPYGTFRAEQGSYALVDLFTRYQVTKNFSLQGNVNNLFDKTYDTNVEGSIVYGAPRN CCCCCCCCEECCCCCEEHHHHHHHHHEEECEEECCCHHHHHCCCCCCCCCCEEEECCCCC FSITGTYQF EEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2162465; 8905232; 9278503; 3032906 [H]