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The map label for this gene is yceH

Identifier: 157160594

GI number: 157160594

Start: 1189836

End: 1190483

Strand: Direct

Name: yceH

Synonym: EcHS_A1190

Alternate gene names: 157160594

Gene position: 1189836-1190483 (Clockwise)

Preceding gene: 157160593

Following gene: 157160595

Centisome position: 25.62

GC content: 52.01

Gene sequence:

>648_bases
ATGAAATATCAACTTACTGCCCTGGAAGCTCGTGTGATTGGTTGCTTGCTGGAAAAGCAGGTGACCACGCCGGAGCAATA
CCCGCTCTCAGTCAATGGTGTAGTCACGGCCTGTAATCAGAAAACGAACCGTGAACCGGTCATGAATCTGAGTGAATCCG
AGGTGCAGGAGCAACTGGATAATCTGGTCAAACGCCATTATCTGCGCACGGTGAGTGGCTTTGGTAATCGGGTCACCAAA
TATGAACAACGTTTTTGTAATTCAGAATTTGGCGATCTGAAACTGAGCGCCGCAGAAGTGGCGTTAATCACCACGTTGTT
ATTGCGTGGTGCCCAGACGCCGGGTGAACTGCGCAGCCGCGCCGCGCGAATGTATGAATTCAGCGATATGGCGGAAGTTG
AGTCGACGCTGGAACAACTGGCAAATCGCGAAGATGGTCCTTTTGTGGTGCGTCTGGCCCGCGAACCGGGTAAACGTGAA
AGCCGCTACATGCATCTTTTCAGTGGTGAGGTTGAAGATCAGCCGGCGGTAACGGATATGTCGAACGCGGTTGACGGTGA
TTTACAGGCCCGCGTCGAAGCTCTGGAAATCGAAGTGGCAGAACTGAAACAGCGTCTTGATTCGTTGCTGGCCCATCTGG
GAGATTAA

Upstream 100 bases:

>100_bases
TATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACTGGACGCC
CGGCCGCTAAGGAGAATCTC

Downstream 100 bases:

>100_bases
AGTGAAAAAATTACGTATCGGCGTAGTGGGATTAGGCGGCATTGCGCAAAAAGCGTGGTTACCGGTGCTGGCGGCAGCGT
CTGACTGGATGTTACAAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MKYQLTALEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLSESEVQEQLDNLVKRHYLRTVSGFGNRVTK
YEQRFCNSEFGDLKLSAAEVALITTLLLRGAQTPGELRSRAARMYEFSDMAEVESTLEQLANREDGPFVVRLAREPGKRE
SRYMHLFSGEVEDQPAVTDMSNAVDGDLQARVEALEIEVAELKQRLDSLLAHLGD

Sequences:

>Translated_215_residues
MKYQLTALEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLSESEVQEQLDNLVKRHYLRTVSGFGNRVTK
YEQRFCNSEFGDLKLSAAEVALITTLLLRGAQTPGELRSRAARMYEFSDMAEVESTLEQLANREDGPFVVRLAREPGKRE
SRYMHLFSGEVEDQPAVTDMSNAVDGDLQARVEALEIEVAELKQRLDSLLAHLGD
>Mature_215_residues
MKYQLTALEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLSESEVQEQLDNLVKRHYLRTVSGFGNRVTK
YEQRFCNSEFGDLKLSAAEVALITTLLLRGAQTPGELRSRAARMYEFSDMAEVESTLEQLANREDGPFVVRLAREPGKRE
SRYMHLFSGEVEDQPAVTDMSNAVDGDLQARVEALEIEVAELKQRLDSLLAHLGD

Specific function: Unknown

COG id: COG3132

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0502 family

Homologues:

Organism=Escherichia coli, GI1787306, Length=215, Percent_Identity=99.5348837209302, Blast_Score=439, Evalue=1e-125,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YCEH_ECO24 (A7ZKH2)

Other databases:

- EMBL:   CP000800
- RefSeq:   YP_001462301.1
- ProteinModelPortal:   A7ZKH2
- SMR:   A7ZKH2
- STRING:   A7ZKH2
- EnsemblBacteria:   EBESCT00000019090
- GeneID:   5586121
- GenomeReviews:   CP000800_GR
- KEGG:   ecw:EcE24377A_1190
- eggNOG:   COG3132
- GeneTree:   EBGT00050000011923
- HOGENOM:   HBG298268
- OMA:   TTPDQYP
- ProtClustDB:   PRK11239
- BioCyc:   ECOL331111:ECE24377A_1190-MONOMER
- HAMAP:   MF_01584
- InterPro:   IPR007432
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10

Pfam domain/function: PF04337 DUF480

EC number: NA

Molecular weight: Translated: 24151; Mature: 24151

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYQLTALEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLSESEVQEQLD
CCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCHHCCCCHHHHHHHHH
NLVKRHYLRTVSGFGNRVTKYEQRFCNSEFGDLKLSAAEVALITTLLLRGAQTPGELRSR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHCCCCHHHHHHH
AARMYEFSDMAEVESTLEQLANREDGPFVVRLAREPGKRESRYMHLFSGEVEDQPAVTDM
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHEEHHHCCCCCCCCCHHHH
SNAVDGDLQARVEALEIEVAELKQRLDSLLAHLGD
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKYQLTALEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLSESEVQEQLD
CCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCHHCCCCHHHHHHHHH
NLVKRHYLRTVSGFGNRVTKYEQRFCNSEFGDLKLSAAEVALITTLLLRGAQTPGELRSR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHCCCCHHHHHHH
AARMYEFSDMAEVESTLEQLANREDGPFVVRLAREPGKRESRYMHLFSGEVEDQPAVTDM
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHEEHHHCCCCCCCCCHHHH
SNAVDGDLQARVEALEIEVAELKQRLDSLLAHLGD
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA