Definition | Escherichia coli HS, complete genome. |
---|---|
Accession | NC_009800 |
Length | 4,643,538 |
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The map label for this gene is 157160355
Identifier: 157160355
GI number: 157160355
Start: 936357
End: 936935
Strand: Direct
Name: 157160355
Synonym: EcHS_A0936
Alternate gene names: NA
Gene position: 936357-936935 (Clockwise)
Preceding gene: 157160354
Following gene: 157160356
Centisome position: 20.16
GC content: 55.79
Gene sequence:
>579_bases ATGAACGCACAATTAACCGAAATCATGCGCCTTATCACCAATCTGATCCGCACAGGTGTAGTCACCGAAGTGGACCGGGA AAACTGGCTTTGTCGGGTGAAAACGGGCGACCTTGAAACCAACTGGATTAACTGGCTGACGCTGCGCGCGGGTAATGCCT GCACATGGTGGAAACCATCGGAAGGTGAGCAGGTGGTGCTGCTGAGTCTGGGAGGCAATCTGGAAACCGCGTTTGCGCTG CCCGCCATCTATTCGAATCAGTTCGCGCCACCGTCGACGTCGGCGGACGCCTGCGTGACAGAACATCCTGACGGTGGCTG GTTTGAATACGAACCCGCCACCGGGCGCTGGTATGTCAGGGGCATCAAATCAATGGTCATTGAGGCCGCTGACAACATCA CCATGAAAACCAATGAGTTTGTACTGGAGGCTGACCGCACGCGCATTAACAGCGAAGTGGTGATCAATGGTGGCGTTACC CAGGGCGGCGGTGCAATGAGTTCTAACGGAATTGTGGTTGATGCACATCAGCATACTGGCGTCCTGAAAGGCGGCGACAC AACCGGAGGCCCGGTATGA
Upstream 100 bases:
>100_bases GCGACATGATTCTGCAATGGCTGGCGGGGTGATCTTTGTATCAGCACTGATACAAGTTGCAGCACTGCCGCCTTTCTTCC CCTGATGGCAACCTTTCCCT
Downstream 100 bases:
>100_bases CGCTTTATAGCGGGATGAACAATACCAGCGGCAAAGTCATTACTGATATTGACCATCTGCGCCAGTCGGTGCGGGACATT CTGCTGACGCCGCAGGGTAG
Product: phage baseplate assembly protein V
Products: NA
Alternate protein names: Baseplate Assembly Protein V; Phage Baseplate Assembly Protein; Phage-Related Baseplate Assembly Protein; Phage-Related Baseplate Protein; Baseplate Assembly Protein GpV; Phage-Related Baseplate Assembly Protein V; Baseplate Assembly Protein; Phage P2-Like Baseplate Assembly Protein; Phage P2 Baseplate Assembly GpV Protein; Bacteriophage Baseplate Assembly Protein V; Phage Tail Spike Protein; Phage Baseplate Assembly; Phage Baseplate Component; Prophage LambdaW5 Baseplate Assembly Protein V; Baseplate Assembly Protein V Prophage; Prophage Baseplate Assembly Protein; Phage P2 Baseplate Assembly GpV-Like Protein; Bacteriophage Baseplate Protein; Phage Baseplate Assembly-Like Protein; Bacteriophage P2 Baseplate Assembly Protein GPV; Phage Baseplate Protein
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MNAQLTEIMRLITNLIRTGVVTEVDRENWLCRVKTGDLETNWINWLTLRAGNACTWWKPSEGEQVVLLSLGGNLETAFAL PAIYSNQFAPPSTSADACVTEHPDGGWFEYEPATGRWYVRGIKSMVIEAADNITMKTNEFVLEADRTRINSEVVINGGVT QGGGAMSSNGIVVDAHQHTGVLKGGDTTGGPV
Sequences:
>Translated_192_residues MNAQLTEIMRLITNLIRTGVVTEVDRENWLCRVKTGDLETNWINWLTLRAGNACTWWKPSEGEQVVLLSLGGNLETAFAL PAIYSNQFAPPSTSADACVTEHPDGGWFEYEPATGRWYVRGIKSMVIEAADNITMKTNEFVLEADRTRINSEVVINGGVT QGGGAMSSNGIVVDAHQHTGVLKGGDTTGGPV >Mature_192_residues MNAQLTEIMRLITNLIRTGVVTEVDRENWLCRVKTGDLETNWINWLTLRAGNACTWWKPSEGEQVVLLSLGGNLETAFAL PAIYSNQFAPPSTSADACVTEHPDGGWFEYEPATGRWYVRGIKSMVIEAADNITMKTNEFVLEADRTRINSEVVINGGVT QGGGAMSSNGIVVDAHQHTGVLKGGDTTGGPV
Specific function: Unknown
COG id: COG4540
COG function: function code R; Phage P2 baseplate assembly protein gpV
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20839; Mature: 20839
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAQLTEIMRLITNLIRTGVVTEVDRENWLCRVKTGDLETNWINWLTLRAGNACTWWKPS CCCHHHHHHHHHHHHHHCCCEEEECCCCCEEEEECCCCCCCEEEEEEEECCCEEECCCCC EGEQVVLLSLGGNLETAFALPAIYSNQFAPPSTSADACVTEHPDGGWFEYEPATGRWYVR CCCEEEEEEECCCCCEEEECCHHHCCCCCCCCCCCCCEEEECCCCCEEEECCCCCCHHHH GIKSMVIEAADNITMKTNEFVLEADRTRINSEVVINGGVTQGGGAMSSNGIVVDAHQHTG HHHHHHHHHCCCEEEECCEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCC VLKGGDTTGGPV EEECCCCCCCCC >Mature Secondary Structure MNAQLTEIMRLITNLIRTGVVTEVDRENWLCRVKTGDLETNWINWLTLRAGNACTWWKPS CCCHHHHHHHHHHHHHHCCCEEEECCCCCEEEEECCCCCCCEEEEEEEECCCEEECCCCC EGEQVVLLSLGGNLETAFALPAIYSNQFAPPSTSADACVTEHPDGGWFEYEPATGRWYVR CCCEEEEEEECCCCCEEEECCHHHCCCCCCCCCCCCCEEEECCCCCEEEECCCCCCHHHH GIKSMVIEAADNITMKTNEFVLEADRTRINSEVVINGGVTQGGGAMSSNGIVVDAHQHTG HHHHHHHHHCCCEEEECCEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCC VLKGGDTTGGPV EEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA