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The map label for this gene is ybgP [H]

Identifier: 157160197

GI number: 157160197

Start: 775059

End: 775790

Strand: Reverse

Name: ybgP [H]

Synonym: EcHS_A0765

Alternate gene names: 157160197

Gene position: 775790-775059 (Counterclockwise)

Preceding gene: 157160198

Following gene: 157160196

Centisome position: 16.71

GC content: 49.86

Gene sequence:

>732_bases
ATGACATTTATGAAAGGACTACCCCTTTTGTTGTTGGTTGCCAGTCTGTGCAGCCACGCTGCACTACAACCCGATCGCAC
TCGTATTGTGTTCAACGCTAATGATAAAGCTACCAGTCTGCGAGTAGATAATCGTAGCGATAAACTCCCCTACCTCGCTT
ATTCCTGGCTCGAAAATGAAAAAGGGGAGAAAAGCGACGATCTTCTGGTCGCCCTGCCACCGATACAACGTCTGGAACCG
AAAGCAACAACGCAGGTGCGGATAGTCAAGCAAGCGTCGACCGCGAAATTACCAGGCGATCGCGAAACGCTATTTTTCTA
CAATATACGTGAAGTTCCTCCCGCCCCGGAAAAAAACAGCGACCATGCCGTTTTGCAAGTCGCCATCCAGAGTCGTATCA
AGGTGTTCTGGAGACCGGCTGCATTACGCAAGAAAGCAGGAGAAAAGGTCGAACTGCAGTTACAGGTCAGCCAGCAGGGT
AACCAACTGACACTGAAAAATCCTACCGCGTATTATCTGACCATTGCCTACCTGGGACGAAATGAAAAAGGCGTTCTCCC
CGGCTTCAAAACCGTGATGGTTGCGCCTTTTAGTACGGTCAACACAAACACCGGAAGCTATAGCGGCAGCCAGTTCTATC
TCGGTTATATGGATGATTACGGCGCGTTACGCATGACGATGCTCAACTGCAGCGGACAATGCCATTTACAAGCCGTGGAG
GCGAAGAAATGA

Upstream 100 bases:

>100_bases
TCTGGGGTGATAGCCAGCATTGCTCGCTCCATCTTCCTGAACATATGGAAGACACCGCAAATCGCCTGATTTTACCTTGT
CATTAATTAAGGAAATGAAA

Downstream 100 bases:

>100_bases
GTGCTGGCAAGGGAGTGTTGCTCGTCATCTGTCTGTTATTTCTGCCGTTGAAGTCTGCGCTTGCCCTGAACTGCTACTTT
GGTTCATCCGGTGGCTCGGT

Product: periplasmic pilus chaperone family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MTFMKGLPLLLLVASLCSHAALQPDRTRIVFNANDKATSLRVDNRSDKLPYLAYSWLENEKGEKSDDLLVALPPIQRLEP
KATTQVRIVKQASTAKLPGDRETLFFYNIREVPPAPEKNSDHAVLQVAIQSRIKVFWRPAALRKKAGEKVELQLQVSQQG
NQLTLKNPTAYYLTIAYLGRNEKGVLPGFKTVMVAPFSTVNTNTGSYSGSQFYLGYMDDYGALRMTMLNCSGQCHLQAVE
AKK

Sequences:

>Translated_243_residues
MTFMKGLPLLLLVASLCSHAALQPDRTRIVFNANDKATSLRVDNRSDKLPYLAYSWLENEKGEKSDDLLVALPPIQRLEP
KATTQVRIVKQASTAKLPGDRETLFFYNIREVPPAPEKNSDHAVLQVAIQSRIKVFWRPAALRKKAGEKVELQLQVSQQG
NQLTLKNPTAYYLTIAYLGRNEKGVLPGFKTVMVAPFSTVNTNTGSYSGSQFYLGYMDDYGALRMTMLNCSGQCHLQAVE
AKK
>Mature_242_residues
TFMKGLPLLLLVASLCSHAALQPDRTRIVFNANDKATSLRVDNRSDKLPYLAYSWLENEKGEKSDDLLVALPPIQRLEPK
ATTQVRIVKQASTAKLPGDRETLFFYNIREVPPAPEKNSDHAVLQVAIQSRIKVFWRPAALRKKAGEKVELQLQVSQQGN
QLTLKNPTAYYLTIAYLGRNEKGVLPGFKTVMVAPFSTVNTNTGSYSGSQFYLGYMDDYGALRMTMLNCSGQCHLQAVEA
KK

Specific function: Could be required for the biogenesis of the putative ybgD fimbria [H]

COG id: COG3121

COG function: function code NU; P pilus assembly protein, chaperone PapD

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Ig-like (immunoglobulin-like) domain [H]

Homologues:

Organism=Escherichia coli, GI1786936, Length=242, Percent_Identity=89.6694214876033, Blast_Score=461, Evalue=1e-131,
Organism=Escherichia coli, GI87082203, Length=227, Percent_Identity=39.647577092511, Blast_Score=182, Evalue=1e-47,
Organism=Escherichia coli, GI1788677, Length=225, Percent_Identity=37.3333333333333, Blast_Score=161, Evalue=3e-41,
Organism=Escherichia coli, GI1790771, Length=226, Percent_Identity=31.858407079646, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI1788428, Length=226, Percent_Identity=30.9734513274336, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1786333, Length=210, Percent_Identity=30.4761904761905, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1787171, Length=206, Percent_Identity=34.9514563106796, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1789532, Length=219, Percent_Identity=30.1369863013699, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1786743, Length=233, Percent_Identity=33.0472103004292, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI87081806, Length=232, Percent_Identity=29.7413793103448, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008962
- InterPro:   IPR001829
- InterPro:   IPR016148
- InterPro:   IPR018046
- InterPro:   IPR016147 [H]

Pfam domain/function: PF02753 Pili_assembly_C; PF00345 Pili_assembly_N [H]

EC number: NA

Molecular weight: Translated: 27140; Mature: 27008

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: PS00635 PILI_CHAPERONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFMKGLPLLLLVASLCSHAALQPDRTRIVFNANDKATSLRVDNRSDKLPYLAYSWLENE
CCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCCCCCEEEEEECCCC
KGEKSDDLLVALPPIQRLEPKATTQVRIVKQASTAKLPGDRETLFFYNIREVPPAPEKNS
CCCCCCCEEEEECCHHHCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCC
DHAVLQVAIQSRIKVFWRPAALRKKAGEKVELQLQVSQQGNQLTLKNPTAYYLTIAYLGR
CHHEEHEEHHHHHEEEECCHHHHHCCCCEEEEEEEECCCCCEEEEECCCEEEEEEEEECC
NEKGVLPGFKTVMVAPFSTVNTNTGSYSGSQFYLGYMDDYGALRMTMLNCSGQCHLQAVE
CCCCCCCCCEEEEEECCEEECCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCEEEEEEC
AKK
CCC
>Mature Secondary Structure 
TFMKGLPLLLLVASLCSHAALQPDRTRIVFNANDKATSLRVDNRSDKLPYLAYSWLENE
CCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCCCCCEEEEEECCCC
KGEKSDDLLVALPPIQRLEPKATTQVRIVKQASTAKLPGDRETLFFYNIREVPPAPEKNS
CCCCCCCEEEEECCHHHCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCC
DHAVLQVAIQSRIKVFWRPAALRKKAGEKVELQLQVSQQGNQLTLKNPTAYYLTIAYLGR
CHHEEHEEHHHHHEEEECCHHHHHCCCCEEEEEEEECCCCCEEEEECCCEEEEEEEEECC
NEKGVLPGFKTVMVAPFSTVNTNTGSYSGSQFYLGYMDDYGALRMTMLNCSGQCHLQAVE
CCCCCCCCCEEEEEECCEEECCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCEEEEEEC
AKK
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]