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The map label for this gene is ybfC

Identifier: 157160183

GI number: 157160183

Start: 761730

End: 762299

Strand: Direct

Name: ybfC

Synonym: EcHS_A0750

Alternate gene names: 157160183

Gene position: 761730-762299 (Clockwise)

Preceding gene: 157160182

Following gene: 157160184

Centisome position: 16.4

GC content: 36.67

Gene sequence:

>570_bases
ATGAAAAGAGTTTTGTTCTTTTTGCTGATGATATTTGTTAGTTTTGGTGTTATAGCTGATTGCGAAATACAAGCTAAAGA
TCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGCCATGTGGAGAT
GGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCACACCAAGC
GGGGCGAGACTCTTAATTCGCGTCGGGTCACTACGCCTTAATGAAAATCATGCCATCAAAGGAACGTTGCAGGAGTTGAT
AAATACAGCAGAAAAAACGGCGTTTCTCGGCGATCGGTTTAGAAGTTATATAAGAGCGGGTATCTATCAAAAAAAGAGCA
GTGATCCAGTTCAGTTGTTGGCAGTCCTTGATAATTCAATCATGGTAAAATATTTTAAAGATGAGAAACCAACTTATGCT
CGAATGACAGCACATCTCCCGAACAAAAATGAGTCTTACGAATGTTTAATAAAGATACAGCATGAACTAATTCGTAGTGA
AGAGAAATAA

Upstream 100 bases:

>100_bases
CAGACATTAATAAACCCGATGGGCCAGCAACAGCAGGGATAGATGATTTGGGTGAAATTTTAGCTAAGATGAAACAGAGA
ACATCGAGAGGAATAAGAAA

Downstream 100 bases:

>100_bases
AATCTCTTCCTGAGAAAACAAATTAATCATTGTGAAAAATTATATAACTCATGGAATAGGTGTTTATTTTGCGTTCCATT
TGCAGGGAAAGATCACGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MKRVLFFLLMIFVSFGVIADCEIQAKDHDCFTIFAKGTIFSAFPVLNNKAMWRWYQNEDIGEYYWQTELGTCKNNKFTPS
GARLLIRVGSLRLNENHAIKGTLQELINTAEKTAFLGDRFRSYIRAGIYQKKSSDPVQLLAVLDNSIMVKYFKDEKPTYA
RMTAHLPNKNESYECLIKIQHELIRSEEK

Sequences:

>Translated_189_residues
MKRVLFFLLMIFVSFGVIADCEIQAKDHDCFTIFAKGTIFSAFPVLNNKAMWRWYQNEDIGEYYWQTELGTCKNNKFTPS
GARLLIRVGSLRLNENHAIKGTLQELINTAEKTAFLGDRFRSYIRAGIYQKKSSDPVQLLAVLDNSIMVKYFKDEKPTYA
RMTAHLPNKNESYECLIKIQHELIRSEEK
>Mature_189_residues
MKRVLFFLLMIFVSFGVIADCEIQAKDHDCFTIFAKGTIFSAFPVLNNKAMWRWYQNEDIGEYYWQTELGTCKNNKFTPS
GARLLIRVGSLRLNENHAIKGTLQELINTAEKTAFLGDRFRSYIRAGIYQKKSSDPVQLLAVLDNSIMVKYFKDEKPTYA
RMTAHLPNKNESYECLIKIQHELIRSEEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786922, Length=189, Percent_Identity=100, Blast_Score=398, Evalue=1e-112,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YBFC_ECOLI (P28915)

Other databases:

- EMBL:   L02373
- EMBL:   U00096
- EMBL:   AP009048
- PIR:   G64805
- RefSeq:   AP_001342.1
- RefSeq:   NP_415232.1
- STRING:   P28915
- EnsemblBacteria:   EBESCT00000004358
- EnsemblBacteria:   EBESCT00000014913
- GeneID:   947288
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW0693
- KEGG:   eco:b0704
- EchoBASE:   EB1485
- EcoGene:   EG11523
- GeneTree:   EBGT00050000010043
- HOGENOM:   HBG467573
- OMA:   FFLLMMF
- ProtClustDB:   CLSK879728
- BioCyc:   EcoCyc:EG11523-MONOMER
- Genevestigator:   P28915

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21962; Mature: 21962

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRVLFFLLMIFVSFGVIADCEIQAKDHDCFTIFAKGTIFSAFPVLNNKAMWRWYQNEDI
CHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEECCCEEEECCCCCCCEEEEEECCCCC
GEYYWQTELGTCKNNKFTPSGARLLIRVGSLRLNENHAIKGTLQELINTAEKTAFLGDRF
CHHEEECCCCCCCCCCCCCCCCEEEEEECCEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
RSYIRAGIYQKKSSDPVQLLAVLDNSIMVKYFKDEKPTYARMTAHLPNKNESYECLIKIQ
HHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEECCCCCCEEEEEEECCCCCCCHHHHHHHH
HELIRSEEK
HHHHCCCCC
>Mature Secondary Structure
MKRVLFFLLMIFVSFGVIADCEIQAKDHDCFTIFAKGTIFSAFPVLNNKAMWRWYQNEDI
CHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEECCCEEEECCCCCCCEEEEEECCCCC
GEYYWQTELGTCKNNKFTPSGARLLIRVGSLRLNENHAIKGTLQELINTAEKTAFLGDRF
CHHEEECCCCCCCCCCCCCCCCEEEEEECCEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
RSYIRAGIYQKKSSDPVQLLAVLDNSIMVKYFKDEKPTYARMTAHLPNKNESYECLIKIQ
HHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEECCCCCCEEEEEEECCCCCCCHHHHHHHH
HELIRSEEK
HHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8387990; 8905232; 9278503