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The map label for this gene is ybcI

Identifier: 157160051

GI number: 157160051

Start: 615553

End: 616074

Strand: Reverse

Name: ybcI

Synonym: EcHS_A0602

Alternate gene names: 157160051

Gene position: 616074-615553 (Counterclockwise)

Preceding gene: 157160052

Following gene: 157160049

Centisome position: 13.27

GC content: 53.07

Gene sequence:

>522_bases
ATGCCAACCGTTATTACGCACGCCGCCGTTCCCCTATGCATTGGTTTAGGGTTGGGTTCGAAAGTCATCCCTCCGCGTCT
GTTATTTGCCGGAATCATCCTGGCGATGCTGCCCGACGCCGACGTATTGTCGTTTAAATTTGGCGTTGCTTACGGCAATG
TTTTTGGTCATCGCGGGTTTACCCATTCGCTGGTGTTTGCGTTTGTTGTCCCGCTGTTATGTGTGTTTATTGGACGCCGA
TGGTTCAGGGCTGGGCTGATTCGCTGCTGGCTGTTTTTAACCGTCTCGTTGCTATCGCACAGCTTGCTGGATTCGGTAAC
CACTGGCGGTAAAGGCGTTGGCTGGCTGTGGCCGTGGTCAGATGAACGCTTTTTCGCTCCCTGGCAGGTGATAAAAGTCG
CGCCGTTTGCATTGTCTCGTTACACCACGCCGTACGGGCATCAGGTGATTATTTCTGAATTGATGTGGGTGTGGTTGCCG
GGGATGCTACTGATGGGAATGTTGTGGTGGCGCAGACGATAA

Upstream 100 bases:

>100_bases
CCCGGCCTGTATCAACAGGCCGGTTCTCTTTTCAGACTTTTGCCCTCTACGCCCCGTTCATCCATGCTGATAGCATCGAC
ATTTTGCCGAAGCGACCATC

Downstream 100 bases:

>100_bases
CCGGATGCGAAAACTCGCATCCGGCAATAGCGCAATTACTTACGACGCCAGGTGGTCCCTTGCGGGCCATCTTCCAGCAC
GATCCCCATCTCGTTAAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MPTVITHAAVPLCIGLGLGSKVIPPRLLFAGIILAMLPDADVLSFKFGVAYGNVFGHRGFTHSLVFAFVVPLLCVFIGRR
WFRAGLIRCWLFLTVSLLSHSLLDSVTTGGKGVGWLWPWSDERFFAPWQVIKVAPFALSRYTTPYGHQVIISELMWVWLP
GMLLMGMLWWRRR

Sequences:

>Translated_173_residues
MPTVITHAAVPLCIGLGLGSKVIPPRLLFAGIILAMLPDADVLSFKFGVAYGNVFGHRGFTHSLVFAFVVPLLCVFIGRR
WFRAGLIRCWLFLTVSLLSHSLLDSVTTGGKGVGWLWPWSDERFFAPWQVIKVAPFALSRYTTPYGHQVIISELMWVWLP
GMLLMGMLWWRRR
>Mature_172_residues
PTVITHAAVPLCIGLGLGSKVIPPRLLFAGIILAMLPDADVLSFKFGVAYGNVFGHRGFTHSLVFAFVVPLLCVFIGRRW
FRAGLIRCWLFLTVSLLSHSLLDSVTTGGKGVGWLWPWSDERFFAPWQVIKVAPFALSRYTTPYGHQVIISELMWVWLPG
MLLMGMLWWRRR

Specific function: Unknown

COG id: COG1988

COG function: function code R; Predicted membrane-bound metal-dependent hydrolases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786738, Length=173, Percent_Identity=100, Blast_Score=343, Evalue=3e-96,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YBCI_ECOLI (P45570)

Other databases:

- EMBL:   U82664
- EMBL:   U00096
- EMBL:   AP009048
- EMBL:   D10588
- EMBL:   X59293
- PIR:   F64784
- RefSeq:   AP_001174.1
- RefSeq:   NP_415060.1
- ProteinModelPortal:   P45570
- STRING:   P45570
- EnsemblBacteria:   EBESCT00000004670
- EnsemblBacteria:   EBESCT00000015246
- GeneID:   945155
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW0516
- KEGG:   eco:b0527
- EchoBASE:   EB2570
- EcoGene:   EG12708
- eggNOG:   COG1988
- GeneTree:   EBGT00050000009015
- HOGENOM:   HBG468052
- OMA:   WGHRGFS
- ProtClustDB:   CLSK879692
- BioCyc:   EcoCyc:EG12708-MONOMER
- Genevestigator:   P45570
- InterPro:   IPR007404

Pfam domain/function: PF04307 DUF457

EC number: NA

Molecular weight: Translated: 19531; Mature: 19399

Theoretical pI: Translated: 10.88; Mature: 10.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x123c3f88)-; HASH(0x11a349a0)-; HASH(0x12d8cdf4)-; HASH(0x13465380)-;

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTVITHAAVPLCIGLGLGSKVIPPRLLFAGIILAMLPDADVLSFKFGVAYGNVFGHRGF
CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCH
THSLVFAFVVPLLCVFIGRRWFRAGLIRCWLFLTVSLLSHSLLDSVTTGGKGVGWLWPWS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
DERFFAPWQVIKVAPFALSRYTTPYGHQVIISELMWVWLPGMLLMGMLWWRRR
CCCEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure 
PTVITHAAVPLCIGLGLGSKVIPPRLLFAGIILAMLPDADVLSFKFGVAYGNVFGHRGF
CCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCH
THSLVFAFVVPLLCVFIGRRWFRAGLIRCWLFLTVSLLSHSLLDSVTTGGKGVGWLWPWS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
DERFFAPWQVIKVAPFALSRYTTPYGHQVIISELMWVWLPGMLLMGMLWWRRR
CCCEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 7567469