| Definition | Escherichia coli HS, complete genome. |
|---|---|
| Accession | NC_009800 |
| Length | 4,643,538 |
Click here to switch to the map view.
The map label for this gene is 157159893
Identifier: 157159893
GI number: 157159893
Start: 460322
End: 460516
Strand: Direct
Name: 157159893
Synonym: EcHS_A0440
Alternate gene names: NA
Gene position: 460322-460516 (Clockwise)
Preceding gene: 157159890
Following gene: 157159894
Centisome position: 9.91
GC content: 45.13
Gene sequence:
>195_bases ATGCCTGCATTTGTGATCCTGCGCGTGTTAATCCGCTTATGTAAACAATCTTTGGTTTGTGAAATCCGTCGAAACAATTC TTATGGTCAGGCTGGCGAACTAAGCGCCTTGCTATGGGTCACAATGGGCGGTTTCATTTGGCTGACGCTTTGTAGCGGTC ATGCGGTTAATACACAGCAGTTGTTAAAACGATAA
Upstream 100 bases:
>100_bases TATTTATACTACTCATTGATGGATTGCAAAGGGCGAATTAGTGCAATAATAGTGTTAAAAACGTAACGGCGCGTAAACAC GATCTTTTTCCTGCTCACCA
Downstream 100 bases:
>100_bases GAAGTTAGCAGGAGTGCATATGTTTAAGTCTTTTTTCCCAAAGCCGGGAGCGTTTTTTCTCTCGGCCTTTGTTTGGGCAT TGATTGCCGTTATCTTCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 64; Mature: 63
Protein sequence:
>64_residues MPAFVILRVLIRLCKQSLVCEIRRNNSYGQAGELSALLWVTMGGFIWLTLCSGHAVNTQQLLKR
Sequences:
>Translated_64_residues MPAFVILRVLIRLCKQSLVCEIRRNNSYGQAGELSALLWVTMGGFIWLTLCSGHAVNTQQLLKR >Mature_63_residues PAFVILRVLIRLCKQSLVCEIRRNNSYGQAGELSALLWVTMGGFIWLTLCSGHAVNTQQLLKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7219; Mature: 7088
Theoretical pI: Translated: 10.26; Mature: 10.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAFVILRVLIRLCKQSLVCEIRRNNSYGQAGELSALLWVTMGGFIWLTLCSGHAVNTQQ CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHH LLKR HHCC >Mature Secondary Structure PAFVILRVLIRLCKQSLVCEIRRNNSYGQAGELSALLWVTMGGFIWLTLCSGHAVNTQQ CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHH LLKR HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA