Click here to switch to the map view.

The map label for this gene is 157159757

Identifier: 157159757

GI number: 157159757

Start: 309172

End: 309495

Strand: Direct

Name: 157159757

Synonym: EcHS_A0303

Alternate gene names: NA

Gene position: 309172-309495 (Clockwise)

Preceding gene: 157159756

Following gene: 157159758

Centisome position: 6.66

GC content: 48.46

Gene sequence:

>324_bases
ATGAAGATGCCAGAAAAACATGACCTGTTAGCCGCCATTCTCGCGGCAAAGGAACAAGGCATCGGGGCAATCCTTGCGTT
TGCAATGGCGTACCTTCGCGGCAGATATAATGGCGGTGCGTTTACAAAAACAGTAATCGACGCAACGATGTGCGCCATTA
TCGCCTGGTTCATTCGTGACCTTCTCGACTTCGCCGGGCTAAGTAGCAATCTCGCTTATATAACGAGCGTGTTTATCGGC
TACATCGGTACTGACTCGATTGGTTCGCTTATCAAACGCTTCGCTGCTAAAAAAGCCGGAGTAGAAGATGGTGGAAATCA
ATAA

Upstream 100 bases:

>100_bases
TCACGAACAAACCCGTTACAAATCAACCGTAACCCGGATTTGTTCGAGCGACCATATCCATAATTCCTAATTTGAACAGA
TCCCCTTCTGGGGGTAAGAC

Downstream 100 bases:

>100_bases
TCAACGTAAGGCGTTCCTCGATATGCTGGCGTGGTCAGAGGGAACTGATAACGGACGTCAGAAAACCAGGAATCATGGTT
ATGACGTCATTGTTGGCGGA

Product: phage holin

Products: NA

Alternate protein names: Holin [Includes Lysis Protein S; Phage Holin Lambda Family; Lysis Protein S And Lysis Inhibitor; Phage Holin-Like Protein

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MKMPEKHDLLAAILAAKEQGIGAILAFAMAYLRGRYNGGAFTKTVIDATMCAIIAWFIRDLLDFAGLSSNLAYITSVFIG
YIGTDSIGSLIKRFAAKKAGVEDGGNQ

Sequences:

>Translated_107_residues
MKMPEKHDLLAAILAAKEQGIGAILAFAMAYLRGRYNGGAFTKTVIDATMCAIIAWFIRDLLDFAGLSSNLAYITSVFIG
YIGTDSIGSLIKRFAAKKAGVEDGGNQ
>Mature_107_residues
MKMPEKHDLLAAILAAKEQGIGAILAFAMAYLRGRYNGGAFTKTVIDATMCAIIAWFIRDLLDFAGLSSNLAYITSVFIG
YIGTDSIGSLIKRFAAKKAGVEDGGNQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11422; Mature: 11422

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMPEKHDLLAAILAAKEQGIGAILAFAMAYLRGRYNGGAFTKTVIDATMCAIIAWFIRD
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
LLDFAGLSSNLAYITSVFIGYIGTDSIGSLIKRFAAKKAGVEDGGNQ
HHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKMPEKHDLLAAILAAKEQGIGAILAFAMAYLRGRYNGGAFTKTVIDATMCAIIAWFIRD
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
LLDFAGLSSNLAYITSVFIGYIGTDSIGSLIKRFAAKKAGVEDGGNQ
HHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA