Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
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Accession | NC_009784 |
Length | 2,204,018 |
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The map label for this gene is 156977140
Identifier: 156977140
GI number: 156977140
Start: 1114361
End: 1114603
Strand: Reverse
Name: 156977140
Synonym: VIBHAR_05926
Alternate gene names: NA
Gene position: 1114603-1114361 (Counterclockwise)
Preceding gene: 156977143
Following gene: 156977139
Centisome position: 50.57
GC content: 39.92
Gene sequence:
>243_bases ATGATCAAACTAGAAAGAGCACAAAAAGAAGCGTTGGCAGCCGCCATCCAAGAATATATGCAAGACGAGTTAGAAGTGGA AATCGGTCAATTTGATAGTGAGTTTTTGATTGATTTCATCACGGAGAAACTGGCGCCTTTTTATTACAACAAAGGCATTG AGGACGCAAAAGCCGTTATTGAACGACGTATGCTTGAGATGAACGATGAACTGTATGAGATTGAGCAAGAAGTTCAACTC TAA
Upstream 100 bases:
>100_bases CGGCGAAAGGTTATCATAGTACTTTTAGGATAGACTAATTTCGATAGGCAACTTCTTGATCTAAACATCAAAATTGATAA TAGAGTTCCGCAGGTAAAAT
Downstream 100 bases:
>100_bases CTGTCCGTTTTTAAAGTGATTTAAAGTTCCTTCTAATTTTTCGAACAAGTTGTTTGAAAAGGTATTATTGGTTAGATGTA AAGGATGGTAAATAATCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 80; Mature: 80
Protein sequence:
>80_residues MIKLERAQKEALAAAIQEYMQDELEVEIGQFDSEFLIDFITEKLAPFYYNKGIEDAKAVIERRMLEMNDELYEIEQEVQL
Sequences:
>Translated_80_residues MIKLERAQKEALAAAIQEYMQDELEVEIGQFDSEFLIDFITEKLAPFYYNKGIEDAKAVIERRMLEMNDELYEIEQEVQL >Mature_80_residues MIKLERAQKEALAAAIQEYMQDELEVEIGQFDSEFLIDFITEKLAPFYYNKGIEDAKAVIERRMLEMNDELYEIEQEVQL
Specific function: Unknown
COG id: COG5460
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9479; Mature: 9479
Theoretical pI: Translated: 3.90; Mature: 3.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKLERAQKEALAAAIQEYMQDELEVEIGQFDSEFLIDFITEKLAPFYYNKGIEDAKAVI CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH ERRMLEMNDELYEIEQEVQL HHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIKLERAQKEALAAAIQEYMQDELEVEIGQFDSEFLIDFITEKLAPFYYNKGIEDAKAVI CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH ERRMLEMNDELYEIEQEVQL HHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA