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The map label for this gene is yceJ [H]

Identifier: 156977139

GI number: 156977139

Start: 1113647

End: 1114186

Strand: Reverse

Name: yceJ [H]

Synonym: VIBHAR_05925

Alternate gene names: 156977139

Gene position: 1114186-1113647 (Counterclockwise)

Preceding gene: 156977140

Following gene: 156977138

Centisome position: 50.55

GC content: 44.63

Gene sequence:

>540_bases
ATGGAAACACTGGTAAAGAATTACAACCTACCCGCGCGATTTATGCATTGGCTATCGGCGCTTTGCATTATCGGCTTATT
TGCTGTGGGTTTGTGGATGGTCGATCTTAGCTATTACAGTGAATGGTATCGTACTGCACCACATTATCACCGCTCTGTGG
GCATTTTATTAGCAACCCTCACTTTGGCACGCATCGTATGGAAACATGTGACGGCGTCACCAAAAGTGGAAGGGAAACCT
TATGAAGTCGTTGCCGCGAAAGCCGCGCATGGTGTGATGTATCTATTACTCATCACTATCTTTATTTCAGGTTACCTCAT
CTCAACATCTGATGGTCGTGGAATCGAAGTATTTAATTGGTTCACGGTGCCAGGCGCAGGGGAGTTATTCCCTAGTCAGT
CGGATATTGCAGGTGAAATTCACTTCTACGCAGCTTGGGCTGTCATCCTAATGGCAGGTTTACACGCTGCTGCTGCACTA
AAACATCACTTTATCGATAAAGACAACACATTAAGAAAAATGTTAGGAGCTTCAAAATGA

Upstream 100 bases:

>100_bases
GATGTAAAGGATGGTAAATAATCTGTTTCATACAAGGTAAATAAGTTAATGTTGTGTTTCTTGCTCAATATCAACTTAGG
AATATATCTAGGAACGTGAG

Downstream 100 bases:

>100_bases
AAAAGTCACTTTTCGCTACAGGATTAGCAATCGCTATAGCACTACCGTTTGGTGCTAACGCTGCAGATTATGTTATCGAT
ACCAAAGGTGCTCACGCATC

Product: cytochrome b561

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
METLVKNYNLPARFMHWLSALCIIGLFAVGLWMVDLSYYSEWYRTAPHYHRSVGILLATLTLARIVWKHVTASPKVEGKP
YEVVAAKAAHGVMYLLLITIFISGYLISTSDGRGIEVFNWFTVPGAGELFPSQSDIAGEIHFYAAWAVILMAGLHAAAAL
KHHFIDKDNTLRKMLGASK

Sequences:

>Translated_179_residues
METLVKNYNLPARFMHWLSALCIIGLFAVGLWMVDLSYYSEWYRTAPHYHRSVGILLATLTLARIVWKHVTASPKVEGKP
YEVVAAKAAHGVMYLLLITIFISGYLISTSDGRGIEVFNWFTVPGAGELFPSQSDIAGEIHFYAAWAVILMAGLHAAAAL
KHHFIDKDNTLRKMLGASK
>Mature_179_residues
METLVKNYNLPARFMHWLSALCIIGLFAVGLWMVDLSYYSEWYRTAPHYHRSVGILLATLTLARIVWKHVTASPKVEGKP
YEVVAAKAAHGVMYLLLITIFISGYLISTSDGRGIEVFNWFTVPGAGELFPSQSDIAGEIHFYAAWAVILMAGLHAAAAL
KHHFIDKDNTLRKMLGASK

Specific function: Unknown

COG id: COG3038

COG function: function code C; Cytochrome B561

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b561 family [H]

Homologues:

Organism=Escherichia coli, GI1787296, Length=179, Percent_Identity=48.0446927374302, Blast_Score=171, Evalue=2e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00033 Cytochrom_B_N [H]

EC number: NA

Molecular weight: Translated: 19953; Mature: 19953

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METLVKNYNLPARFMHWLSALCIIGLFAVGLWMVDLSYYSEWYRTAPHYHRSVGILLATL
CCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
TLARIVWKHVTASPKVEGKPYEVVAAKAAHGVMYLLLITIFISGYLISTSDGRGIEVFNW
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCEEEEEE
FTVPGAGELFPSQSDIAGEIHFYAAWAVILMAGLHAAAALKHHFIDKDNTLRKMLGASK
EECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCC
>Mature Secondary Structure
METLVKNYNLPARFMHWLSALCIIGLFAVGLWMVDLSYYSEWYRTAPHYHRSVGILLATL
CCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
TLARIVWKHVTASPKVEGKPYEVVAAKAAHGVMYLLLITIFISGYLISTSDGRGIEVFNW
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCEEEEEE
FTVPGAGELFPSQSDIAGEIHFYAAWAVILMAGLHAAAALKHHFIDKDNTLRKMLGASK
EECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]