Click here to switch to the map view.

The map label for this gene is 156980446

Identifier: 156980446

GI number: 156980446

Start: 2260672

End: 2261343

Strand: Reverse

Name: 156980446

Synonym: SAHV_2115

Alternate gene names: NA

Gene position: 2261343-2260672 (Counterclockwise)

Preceding gene: 156980447

Following gene: 156980444

Centisome position: 78.51

GC content: 31.99

Gene sequence:

>672_bases
ATGTCTTATAAAGCATATCCATTCTTTAGAGATATATTAATAAATGAATGTATTTATTTCGCCTCTAAAAATAAAAAACT
AGTACGCCTAAATTATAAAAGTGAAGCGTATGTAGGCGTTTGGACAGAAGAAAGTGTGGCCGTATCATTTTTAACAAGTC
GTGATATTCCATTTGATAAAGTTGTAAAAATGGACGTTGATCGTTTTGCTACTTATGAATTAGATGAATTGTTTGATGAA
CAAGACCATATTATTATGAATCAAACAATGGAAGAAGAAGGGCATCTACTAAACGTTGTAGCTGTTACACAAGAAGTGAT
GACGGAATTAGATAAAATTAGAATCAAAGAATTTGTCCAAGATGTAGCAAAATATGATGAAGTATACGGCTTAACTAAAA
AAGGTAGTAAGCAGTTTATTCTCATTAGTGAAAATGATAGCGACGAAAAAAAGCCGCATATTATGCCTGTATGGAGTATT
AAAAACAGAGCGTTAAAAGTTCGAGATGAAGATTTTGAAGAGTGTGATTTAATTACGATTGAAGGTTCTGTTTTCGGAGA
ATGGCTAGATGAACTTAGAGATGATCATAAAGCCGTTGCAATAGATTTAAAAACTGGCGTGGTTGGTACAATTGTTTCAG
CGCAAAAATTGTCTAATGAACTTACATTTTAA

Upstream 100 bases:

>100_bases
ACATGACATTAAATTGAATTCATAATATGTCTAATTGACTAACTTGTTGGAGTCATTTACTATTTTATGTATGACATATT
TTAAAAAGTGAGGGTCAAGC

Downstream 100 bases:

>100_bases
TTGAATTGAGTTGTAAGTAATTAAGTGATAATAAATGGAACAATACGTATTCCAAAACACGTAGACCATAAAATAAAAGG
CCATTTATATAGCGTTTATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MSYKAYPFFRDILINECIYFASKNKKLVRLNYKSEAYVGVWTEESVAVSFLTSRDIPFDKVVKMDVDRFATYELDELFDE
QDHIIMNQTMEEEGHLLNVVAVTQEVMTELDKIRIKEFVQDVAKYDEVYGLTKKGSKQFILISENDSDEKKPHIMPVWSI
KNRALKVRDEDFEECDLITIEGSVFGEWLDELRDDHKAVAIDLKTGVVGTIVSAQKLSNELTF

Sequences:

>Translated_223_residues
MSYKAYPFFRDILINECIYFASKNKKLVRLNYKSEAYVGVWTEESVAVSFLTSRDIPFDKVVKMDVDRFATYELDELFDE
QDHIIMNQTMEEEGHLLNVVAVTQEVMTELDKIRIKEFVQDVAKYDEVYGLTKKGSKQFILISENDSDEKKPHIMPVWSI
KNRALKVRDEDFEECDLITIEGSVFGEWLDELRDDHKAVAIDLKTGVVGTIVSAQKLSNELTF
>Mature_222_residues
SYKAYPFFRDILINECIYFASKNKKLVRLNYKSEAYVGVWTEESVAVSFLTSRDIPFDKVVKMDVDRFATYELDELFDEQ
DHIIMNQTMEEEGHLLNVVAVTQEVMTELDKIRIKEFVQDVAKYDEVYGLTKKGSKQFILISENDSDEKKPHIMPVWSIK
NRALKVRDEDFEECDLITIEGSVFGEWLDELRDDHKAVAIDLKTGVVGTIVSAQKLSNELTF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25856; Mature: 25724

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYKAYPFFRDILINECIYFASKNKKLVRLNYKSEAYVGVWTEESVAVSFLTSRDIPFDK
CCCCCCHHHHHHHHHHHHHEECCCCEEEEEECCCCEEEEEECCCCEEEEEEECCCCCHHH
VVKMDVDRFATYELDELFDEQDHIIMNQTMEEEGHLLNVVAVTQEVMTELDKIRIKEFVQ
HHHHHHHHHHHCCHHHHCCCCCCEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH
DVAKYDEVYGLTKKGSKQFILISENDSDEKKPHIMPVWSIKNRALKVRDEDFEECDLITI
HHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCEEEE
EGSVFGEWLDELRDDHKAVAIDLKTGVVGTIVSAQKLSNELTF
ECHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SYKAYPFFRDILINECIYFASKNKKLVRLNYKSEAYVGVWTEESVAVSFLTSRDIPFDK
CCCCCHHHHHHHHHHHHHEECCCCEEEEEECCCCEEEEEECCCCEEEEEEECCCCCHHH
VVKMDVDRFATYELDELFDEQDHIIMNQTMEEEGHLLNVVAVTQEVMTELDKIRIKEFVQ
HHHHHHHHHHHCCHHHHCCCCCCEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH
DVAKYDEVYGLTKKGSKQFILISENDSDEKKPHIMPVWSIKNRALKVRDEDFEECDLITI
HHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCEEEE
EGSVFGEWLDELRDDHKAVAIDLKTGVVGTIVSAQKLSNELTF
ECHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA