Click here to switch to the map view.

The map label for this gene is 156980429

Identifier: 156980429

GI number: 156980429

Start: 2243385

End: 2243909

Strand: Reverse

Name: 156980429

Synonym: SAHV_2098

Alternate gene names: NA

Gene position: 2243909-2243385 (Counterclockwise)

Preceding gene: 156980430

Following gene: 156980428

Centisome position: 77.91

GC content: 36.57

Gene sequence:

>525_bases
ATGAAAGATTTGACAATGTTATTAGACGAATTAAAAGATATGTCCTTTTTTAATAAAGGAGATATATGTTTAATTGGATG
TTCAACATCGGAAGTCATTGGCGAAAAAATAGGGACTGTCGGTTCGATGGAAGTTGCAGAAACTATTTTTAATGCATTAG
ATGTTGTGAGTAAAGAGACAGGCGTTACTTTTGCTTTTCAAGGATGTGAACATATCAACAGAGCGATAACAATAGAAAAA
TCTCAGTATAATCCATTAACAATGGAAGAAGTTTCCGTCGTTCCAGATGTACATGCTGGAGGGAGTTTGGCAACATACGC
TTTTCAGCATATGAAGGATCCGATCGTGGTCGAACATATTACTGTTCCTTGTGGAATTGATATTGGTCAAACATTAATAG
GCATGCATATTAAACATGTATGTGTACCTGTAAGGACCTCAGTAAAGCAAGTAGGACAGGCAATTGTAACTATTGCCACA
TCTAGGCCGAAAAAGATTGGTGGCGAACGTGCTAAATACAAATAA

Upstream 100 bases:

>100_bases
TTCTGTATAATTAGTATATGTTAACAGTTAAATAAGTTATAATAGAGGAGTGTAGCACTTTGCTATATTCCTTTTTTATT
TTTAGGAAGGGTGGGCTTTT

Downstream 100 bases:

>100_bases
GTTTTTTTGAAAGAAGGGGAGATTTTATGTCTTATATCACCAAGCAAGATAAAGTTATCGCAGAAGCAATCGAGAGAGAA
TTTCAGAGACAAAATAGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MKDLTMLLDELKDMSFFNKGDICLIGCSTSEVIGEKIGTVGSMEVAETIFNALDVVSKETGVTFAFQGCEHINRAITIEK
SQYNPLTMEEVSVVPDVHAGGSLATYAFQHMKDPIVVEHITVPCGIDIGQTLIGMHIKHVCVPVRTSVKQVGQAIVTIAT
SRPKKIGGERAKYK

Sequences:

>Translated_174_residues
MKDLTMLLDELKDMSFFNKGDICLIGCSTSEVIGEKIGTVGSMEVAETIFNALDVVSKETGVTFAFQGCEHINRAITIEK
SQYNPLTMEEVSVVPDVHAGGSLATYAFQHMKDPIVVEHITVPCGIDIGQTLIGMHIKHVCVPVRTSVKQVGQAIVTIAT
SRPKKIGGERAKYK
>Mature_174_residues
MKDLTMLLDELKDMSFFNKGDICLIGCSTSEVIGEKIGTVGSMEVAETIFNALDVVSKETGVTFAFQGCEHINRAITIEK
SQYNPLTMEEVSVVPDVHAGGSLATYAFQHMKDPIVVEHITVPCGIDIGQTLIGMHIKHVCVPVRTSVKQVGQAIVTIAT
SRPKKIGGERAKYK

Specific function: Unknown

COG id: COG4475

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0340 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1916_STAAN (Q7A4E2)

Other databases:

- EMBL:   BA000018
- PIR:   G90004
- RefSeq:   NP_375221.1
- ProteinModelPortal:   Q7A4E2
- SMR:   Q7A4E2
- STRING:   Q7A4E2
- EnsemblBacteria:   EBSTAT00000000585
- GeneID:   1124817
- GenomeReviews:   BA000018_GR
- KEGG:   sau:SA1916
- eggNOG:   COG4475
- GeneTree:   EBGT00050000023961
- HOGENOM:   HBG313927
- OMA:   IDIGDTF
- ProtClustDB:   PRK13690
- BioCyc:   SAUR158879:SA1916-MONOMER
- HAMAP:   MF_00800
- InterPro:   IPR006340
- Gene3D:   G3DSA:3.40.50.10360
- PIRSF:   PIRSF007510
- ProDom:   PD102102
- TIGRFAMs:   TIGR01440

Pfam domain/function: PF04260 DUF436; SSF110710 CHP01440

EC number: NA

Molecular weight: Translated: 18895; Mature: 18895

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDLTMLLDELKDMSFFNKGDICLIGCSTSEVIGEKIGTVGSMEVAETIFNALDVVSKET
CCHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
GVTFAFQGCEHINRAITIEKSQYNPLTMEEVSVVPDVHAGGSLATYAFQHMKDPIVVEHI
CEEEEECCHHHCCCEEEEECCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEE
TVPCGIDIGQTLIGMHIKHVCVPVRTSVKQVGQAIVTIATSRPKKIGGERAKYK
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHCCCCCHHCCCCCCCCC
>Mature Secondary Structure
MKDLTMLLDELKDMSFFNKGDICLIGCSTSEVIGEKIGTVGSMEVAETIFNALDVVSKET
CCHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
GVTFAFQGCEHINRAITIEKSQYNPLTMEEVSVVPDVHAGGSLATYAFQHMKDPIVVEHI
CEEEEECCHHHCCCEEEEECCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEE
TVPCGIDIGQTLIGMHIKHVCVPVRTSVKQVGQAIVTIATSRPKKIGGERAKYK
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHCCCCCHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11418146