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The map label for this gene is atpH

Identifier: 156980421

GI number: 156980421

Start: 2237530

End: 2238069

Strand: Reverse

Name: atpH

Synonym: SAHV_2090

Alternate gene names: 156980421

Gene position: 2238069-2237530 (Counterclockwise)

Preceding gene: 156980422

Following gene: 156980420

Centisome position: 77.71

GC content: 30.0

Gene sequence:

>540_bases
ATGGTAAAAGTAGCTAACAAGTATGCTAAAGCATTATTTGACGTGTCATTAGATACAAATAATTTAGAGACTATTAATGA
AGAATTAACAGTTATAAATGAAGCAGTAAAAGATAAAATTGAGCAATTGAAAATGGTTGACAGTAATCCAACTCAAACAG
CAGAACAACGTCGTGAGTTGATTAATGGTGTATTTACTGACATTAATCCATACATTAAAAATATGATGTACGTGTTAGCA
GATAATAGACATATCTCATTAATAGCTGACGTATTCAAGGCGTTCCAAAGCTTATATAACGGACACTACAATCAAGATTT
TGCAACAATTGAGTCAACATATGAATTGAGTCAAGAAGAGTTAGATAAGATTGTCAAACTAGTAACTCAACAAACGAAGT
TATCTAAAGTTATTGTAGATACAAAAATTAATCCAGATTTAATTGGTGGATTTAGAGTTAAAGTCGGCACAACTGTATTA
GATGGTAGTGTTAGAAATGATCTTGTCCAATTACAAAGAAAATTTAGAAGAGTTAATTAA

Upstream 100 bases:

>100_bases
TATCAGTGTTAATTGCTTCTAAAGTTCTTAGAAAAGAAATTTCTGAACAAGACCAAAAAGCATTGGTTGACAAGTATCTA
AAAGAGGCAGGCGATAAATA

Downstream 100 bases:

>100_bases
TTATAAAGAGGAGTGACATAGATGGCCATAAAAGCTGAAGAAATCAGTGCATTACTTCGCTCACAAATTGAAAATTATGA
GTCAGAAATGTCCGTAACTG

Product: F0F1 ATP synthase subunit delta

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MVKVANKYAKALFDVSLDTNNLETINEELTVINEAVKDKIEQLKMVDSNPTQTAEQRRELINGVFTDINPYIKNMMYVLA
DNRHISLIADVFKAFQSLYNGHYNQDFATIESTYELSQEELDKIVKLVTQQTKLSKVIVDTKINPDLIGGFRVKVGTTVL
DGSVRNDLVQLQRKFRRVN

Sequences:

>Translated_179_residues
MVKVANKYAKALFDVSLDTNNLETINEELTVINEAVKDKIEQLKMVDSNPTQTAEQRRELINGVFTDINPYIKNMMYVLA
DNRHISLIADVFKAFQSLYNGHYNQDFATIESTYELSQEELDKIVKLVTQQTKLSKVIVDTKINPDLIGGFRVKVGTTVL
DGSVRNDLVQLQRKFRRVN
>Mature_179_residues
MVKVANKYAKALFDVSLDTNNLETINEELTVINEAVKDKIEQLKMVDSNPTQTAEQRRELINGVFTDINPYIKNMMYVLA
DNRHISLIADVFKAFQSLYNGHYNQDFATIESTYELSQEELDKIVKLVTQQTKLSKVIVDTKINPDLIGGFRVKVGTTVL
DGSVRNDLVQLQRKFRRVN

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPD_STAA1 (A7X4U8)

Other databases:

- EMBL:   AP009324
- RefSeq:   YP_001442680.1
- ProteinModelPortal:   A7X4U8
- SMR:   A7X4U8
- STRING:   A7X4U8
- EnsemblBacteria:   EBSTAT00000005287
- GeneID:   5561231
- GenomeReviews:   AP009324_GR
- KEGG:   saw:SAHV_2090
- eggNOG:   COG0712
- GeneTree:   EBGT00050000024847
- HOGENOM:   HBG535450
- OMA:   AYDEEAG
- ProtClustDB:   PRK05758
- BioCyc:   SAUR418127:SAHV_2090-MONOMER
- HAMAP:   MF_01416
- InterPro:   IPR000711
- InterPro:   IPR020781
- Gene3D:   G3DSA:1.10.520.20
- PANTHER:   PTHR11910
- PRINTS:   PR00125
- TIGRFAMs:   TIGR01145

Pfam domain/function: PF00213 OSCP; SSF47928 ATPsynt_OSCP

EC number: 3.6.3.14

Molecular weight: Translated: 20471; Mature: 20471

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: PS00389 ATPASE_DELTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKVANKYAKALFDVSLDTNNLETINEELTVINEAVKDKIEQLKMVDSNPTQTAEQRREL
CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
INGVFTDINPYIKNMMYVLADNRHISLIADVFKAFQSLYNGHYNQDFATIESTYELSQEE
HHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHH
LDKIVKLVTQQTKLSKVIVDTKINPDLIGGFRVKVGTTVLDGSVRNDLVQLQRKFRRVN
HHHHHHHHHHHHHHHHHHHCCCCCCHHHCCEEEEECCEEECCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVKVANKYAKALFDVSLDTNNLETINEELTVINEAVKDKIEQLKMVDSNPTQTAEQRREL
CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
INGVFTDINPYIKNMMYVLADNRHISLIADVFKAFQSLYNGHYNQDFATIESTYELSQEE
HHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHH
LDKIVKLVTQQTKLSKVIVDTKINPDLIGGFRVKVGTTVLDGSVRNDLVQLQRKFRRVN
HHHHHHHHHHHHHHHHHHHCCCCCCHHHCCEEEEECCEEECCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA