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The map label for this gene is atpA [H]

Identifier: 156980420

GI number: 156980420

Start: 2236000

End: 2237508

Strand: Reverse

Name: atpA [H]

Synonym: SAHV_2089

Alternate gene names: 156980420

Gene position: 2237508-2236000 (Counterclockwise)

Preceding gene: 156980421

Following gene: 156980419

Centisome position: 77.69

GC content: 36.91

Gene sequence:

>1509_bases
ATGGCCATAAAAGCTGAAGAAATCAGTGCATTACTTCGCTCACAAATTGAAAATTATGAGTCAGAAATGTCCGTAACTGA
TGTAGGTACTGTATTACAAATTGGTGATGGTATTGCATTAATTCACGGATTAAATGACGTTATGGCTGGTGAGCTAGTAG
AATTCCATAACGGCGTACTTGGTTTAGCCCAAAACCTTGAAGAGTCAAACGTGGGTGTGGTTATTTTAGGACCATATACA
GGTATTACTGAAGGTGACGAAGTTAAACGTACTGGTCGTATCATGGAAGTACCAGTAGGTGAAGAACTAATCGGAAGAGT
TGTTAATCCATTAGGACAACCTATTGATGGACAAGGACCGATTAACACAACTAAAACACGTCCAGTAGAGAAAAAAGCTA
CTGGTGTAATGGATCGTAAATCAGTAGATGAGCCATTACAAACAGGTATCAAAGCAATTGATGCTTTAGTACCAATTGGT
AGAGGTCAACGTGAGTTAATCATTGGTGACCGTCAAACAGGTAAAACAACAATTGCAATTGACACAATTTTGAACCAAAA
AGATCAAGGTACGATTTGTATCTATGTTGCTATTGGTCAAAAAGATTCAACAGTAAGAGCAAATGTTGAAAAGTTAAGAC
AAGCAGGCGCTTTAGACTACACTATTGTTGTAGCAGCATCAGCTTCTGAACCTTCTCCATTATTATATATTGCACCATAT
TCAGGTGTAACAATGGGTGAAGAATTCATGTTTAACGGTAAACATGTTTTAATCGTTTATGATGATTTAACTAAACAAGC
AGCAGCTTATCGTGAGTTATCATTATTATTACGTAGACCTCCAGGTCGTGAAGCATACCCAGGTGACGTATTCTACTTAC
ATAGTAGATTATTAGAAAGAGCAGCAAAATTAAACGATGACTTAGGTGGCGGTTCAATTACTGCATTACCAATTATCGAA
ACACAAGCTGGTGATATTTCAGCTTATGTACCAACAAACGTTATTTCAATTACAGATGGACAAATCTTCTTACAATCTGA
TTTATTCTTCTCAGGTGTAAGACCAGCGATTAATGCCGGACAATCTGTATCTCGTGTTGGTGGATCTGCACAAATTAAAG
CAATGAAGAAAGTTGCTGGTACGTTACGTCTTGACTTAGCGTCATACAGAGAACTTGAATCATTTGCACAATTCGGTTCA
GACCTTGATGAATTTACTGCAAGTAAATTAGAACGTGGTAAACGTACCGTTGAAGTCTTAAAACAAGATCAAAACAAACC
ATTACCAGTCGAACACCAAGTGTTGATTATTTATGCATTAACAAAAGGATATTTAGATGATATTCCAGTTGTAGATATCA
CACGTTTTGAAGACGAGTTAAACCACTGGGCAGAATCAAATGCTACTGAACTGTTAAATGAAATCAGAGAAACTGGTGGC
TTACCAGATGCTGAGAAGTTTGACACAGCAATTAACGAATTCAAAAAAAGCTTTAGCAAATCTGAATAA

Upstream 100 bases:

>100_bases
AGTCGGCACAACTGTATTAGATGGTAGTGTTAGAAATGATCTTGTCCAATTACAAAGAAAATTTAGAAGAGTTAATTAAT
TATAAAGAGGAGTGACATAG

Downstream 100 bases:

>100_bases
TAAACAAGTTTAGTATAAGGTGGTGAGATAGTGGCTTCTCTTAAAGAAATAGATACTCGAATAAAATCAACCAAAAAAAT
GAAGCAGATTACGAAAGCGA

Product: F0F1 ATP synthase subunit alpha

Products: NA

Alternate protein names: ATP synthase F1 sector subunit alpha; F-ATPase subunit alpha [H]

Number of amino acids: Translated: 502; Mature: 501

Protein sequence:

>502_residues
MAIKAEEISALLRSQIENYESEMSVTDVGTVLQIGDGIALIHGLNDVMAGELVEFHNGVLGLAQNLEESNVGVVILGPYT
GITEGDEVKRTGRIMEVPVGEELIGRVVNPLGQPIDGQGPINTTKTRPVEKKATGVMDRKSVDEPLQTGIKAIDALVPIG
RGQRELIIGDRQTGKTTIAIDTILNQKDQGTICIYVAIGQKDSTVRANVEKLRQAGALDYTIVVAASASEPSPLLYIAPY
SGVTMGEEFMFNGKHVLIVYDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNDDLGGGSITALPIIE
TQAGDISAYVPTNVISITDGQIFLQSDLFFSGVRPAINAGQSVSRVGGSAQIKAMKKVAGTLRLDLASYRELESFAQFGS
DLDEFTASKLERGKRTVEVLKQDQNKPLPVEHQVLIIYALTKGYLDDIPVVDITRFEDELNHWAESNATELLNEIRETGG
LPDAEKFDTAINEFKKSFSKSE

Sequences:

>Translated_502_residues
MAIKAEEISALLRSQIENYESEMSVTDVGTVLQIGDGIALIHGLNDVMAGELVEFHNGVLGLAQNLEESNVGVVILGPYT
GITEGDEVKRTGRIMEVPVGEELIGRVVNPLGQPIDGQGPINTTKTRPVEKKATGVMDRKSVDEPLQTGIKAIDALVPIG
RGQRELIIGDRQTGKTTIAIDTILNQKDQGTICIYVAIGQKDSTVRANVEKLRQAGALDYTIVVAASASEPSPLLYIAPY
SGVTMGEEFMFNGKHVLIVYDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNDDLGGGSITALPIIE
TQAGDISAYVPTNVISITDGQIFLQSDLFFSGVRPAINAGQSVSRVGGSAQIKAMKKVAGTLRLDLASYRELESFAQFGS
DLDEFTASKLERGKRTVEVLKQDQNKPLPVEHQVLIIYALTKGYLDDIPVVDITRFEDELNHWAESNATELLNEIRETGG
LPDAEKFDTAINEFKKSFSKSE
>Mature_501_residues
AIKAEEISALLRSQIENYESEMSVTDVGTVLQIGDGIALIHGLNDVMAGELVEFHNGVLGLAQNLEESNVGVVILGPYTG
ITEGDEVKRTGRIMEVPVGEELIGRVVNPLGQPIDGQGPINTTKTRPVEKKATGVMDRKSVDEPLQTGIKAIDALVPIGR
GQRELIIGDRQTGKTTIAIDTILNQKDQGTICIYVAIGQKDSTVRANVEKLRQAGALDYTIVVAASASEPSPLLYIAPYS
GVTMGEEFMFNGKHVLIVYDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNDDLGGGSITALPIIET
QAGDISAYVPTNVISITDGQIFLQSDLFFSGVRPAINAGQSVSRVGGSAQIKAMKKVAGTLRLDLASYRELESFAQFGSD
LDEFTASKLERGKRTVEVLKQDQNKPLPVEHQVLIIYALTKGYLDDIPVVDITRFEDELNHWAESNATELLNEIRETGGL
PDAEKFDTAINEFKKSFSKSE

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit [H]

COG id: COG0056

COG function: function code C; F0F1-type ATP synthase, alpha subunit

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase alpha/beta chains family [H]

Homologues:

Organism=Homo sapiens, GI50345984, Length=500, Percent_Identity=59.8, Blast_Score=593, Evalue=1e-169,
Organism=Homo sapiens, GI4757810, Length=500, Percent_Identity=59.8, Blast_Score=593, Evalue=1e-169,
Organism=Homo sapiens, GI19913428, Length=307, Percent_Identity=28.9902280130293, Blast_Score=115, Evalue=1e-25,
Organism=Homo sapiens, GI19913426, Length=302, Percent_Identity=29.4701986754967, Blast_Score=115, Evalue=1e-25,
Organism=Homo sapiens, GI32189394, Length=412, Percent_Identity=25.7281553398058, Blast_Score=112, Evalue=1e-24,
Organism=Homo sapiens, GI19913424, Length=228, Percent_Identity=28.5087719298246, Blast_Score=67, Evalue=5e-11,
Organism=Escherichia coli, GI1790172, Length=512, Percent_Identity=53.515625, Blast_Score=548, Evalue=1e-157,
Organism=Escherichia coli, GI1788251, Length=272, Percent_Identity=31.6176470588235, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI1790170, Length=318, Percent_Identity=26.4150943396226, Blast_Score=108, Evalue=9e-25,
Organism=Caenorhabditis elegans, GI71988063, Length=503, Percent_Identity=60.0397614314115, Blast_Score=593, Evalue=1e-170,
Organism=Caenorhabditis elegans, GI71988080, Length=503, Percent_Identity=60.0397614314115, Blast_Score=592, Evalue=1e-169,
Organism=Caenorhabditis elegans, GI71988074, Length=503, Percent_Identity=56.0636182902585, Blast_Score=541, Evalue=1e-154,
Organism=Caenorhabditis elegans, GI17510931, Length=378, Percent_Identity=28.5714285714286, Blast_Score=132, Evalue=4e-31,
Organism=Caenorhabditis elegans, GI17570191, Length=298, Percent_Identity=28.1879194630872, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI25144756, Length=414, Percent_Identity=24.8792270531401, Blast_Score=105, Evalue=6e-23,
Organism=Caenorhabditis elegans, GI17509265, Length=51, Percent_Identity=60.7843137254902, Blast_Score=75, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI71988068, Length=71, Percent_Identity=45.0704225352113, Blast_Score=69, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6319370, Length=483, Percent_Identity=59.0062111801242, Blast_Score=575, Evalue=1e-165,
Organism=Saccharomyces cerevisiae, GI6322581, Length=411, Percent_Identity=26.0340632603406, Blast_Score=116, Evalue=9e-27,
Organism=Saccharomyces cerevisiae, GI6319603, Length=314, Percent_Identity=28.6624203821656, Blast_Score=114, Evalue=5e-26,
Organism=Drosophila melanogaster, GI24658560, Length=505, Percent_Identity=57.029702970297, Blast_Score=576, Evalue=1e-164,
Organism=Drosophila melanogaster, GI281361666, Length=301, Percent_Identity=28.5714285714286, Blast_Score=122, Evalue=4e-28,
Organism=Drosophila melanogaster, GI24646341, Length=301, Percent_Identity=28.5714285714286, Blast_Score=122, Evalue=4e-28,
Organism=Drosophila melanogaster, GI17136796, Length=301, Percent_Identity=28.5714285714286, Blast_Score=122, Evalue=4e-28,
Organism=Drosophila melanogaster, GI24638766, Length=414, Percent_Identity=27.0531400966184, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI28574560, Length=416, Percent_Identity=25.9615384615385, Blast_Score=99, Evalue=9e-21,
Organism=Drosophila melanogaster, GI20129479, Length=259, Percent_Identity=28.1853281853282, Blast_Score=73, Evalue=4e-13,

Paralogues:

None

Copy number: 9,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020003
- InterPro:   IPR000194
- InterPro:   IPR005294
- InterPro:   IPR017458
- InterPro:   IPR018118
- InterPro:   IPR000793
- InterPro:   IPR004100 [H]

Pfam domain/function: PF00006 ATP-synt_ab; PF00306 ATP-synt_ab_C; PF02874 ATP-synt_ab_N [H]

EC number: =3.6.3.14 [H]

Molecular weight: Translated: 54585; Mature: 54454

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIKAEEISALLRSQIENYESEMSVTDVGTVLQIGDGIALIHGLNDVMAGELVEFHNGVL
CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCHH
GLAQNLEESNVGVVILGPYTGITEGDEVKRTGRIMEVPVGEELIGRVVNPLGQPIDGQGP
HHHHCCCCCCCCEEEECCCCCCCCCHHHHHCCCEEECCCCHHHHHHHHHHHCCCCCCCCC
INTTKTRPVEKKATGVMDRKSVDEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTIAI
CCCCCCCCCHHHHHCCCCHHCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEE
DTILNQKDQGTICIYVAIGQKDSTVRANVEKLRQAGALDYTIVVAASASEPSPLLYIAPY
EHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEECCC
SGVTMGEEFMFNGKHVLIVYDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLER
CCCCCCHHHEECCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
AAKLNDDLGGGSITALPIIETQAGDISAYVPTNVISITDGQIFLQSDLFFSGVRPAINAG
HHHCCCCCCCCCEEEEEEEEECCCCEEEECCCCEEEEECCEEEEECCCHHHCCCHHHCCC
QSVSRVGGSAQIKAMKKVAGTLRLDLASYRELESFAQFGSDLDEFTASKLERGKRTVEVL
CHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
KQDQNKPLPVEHQVLIIYALTKGYLDDIPVVDITRFEDELNHWAESNATELLNEIRETGG
HHCCCCCCCCCCCEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHCCCHHHHHHHHHHHCC
LPDAEKFDTAINEFKKSFSKSE
CCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AIKAEEISALLRSQIENYESEMSVTDVGTVLQIGDGIALIHGLNDVMAGELVEFHNGVL
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCHH
GLAQNLEESNVGVVILGPYTGITEGDEVKRTGRIMEVPVGEELIGRVVNPLGQPIDGQGP
HHHHCCCCCCCCEEEECCCCCCCCCHHHHHCCCEEECCCCHHHHHHHHHHHCCCCCCCCC
INTTKTRPVEKKATGVMDRKSVDEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTTIAI
CCCCCCCCCHHHHHCCCCHHCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEE
DTILNQKDQGTICIYVAIGQKDSTVRANVEKLRQAGALDYTIVVAASASEPSPLLYIAPY
EHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEECCC
SGVTMGEEFMFNGKHVLIVYDDLTKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLER
CCCCCCHHHEECCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
AAKLNDDLGGGSITALPIIETQAGDISAYVPTNVISITDGQIFLQSDLFFSGVRPAINAG
HHHCCCCCCCCCEEEEEEEEECCCCEEEECCCCEEEEECCEEEEECCCHHHCCCHHHCCC
QSVSRVGGSAQIKAMKKVAGTLRLDLASYRELESFAQFGSDLDEFTASKLERGKRTVEVL
CHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
KQDQNKPLPVEHQVLIIYALTKGYLDDIPVVDITRFEDELNHWAESNATELLNEIRETGG
HHCCCCCCCCCCCEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHCCCHHHHHHHHHHHCC
LPDAEKFDTAINEFKKSFSKSE
CCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA