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The map label for this gene is ssb1 [H]

Identifier: 156980300

GI number: 156980300

Start: 2115444

End: 2115914

Strand: Reverse

Name: ssb1 [H]

Synonym: SAHV_1969

Alternate gene names: 156980300

Gene position: 2115914-2115444 (Counterclockwise)

Preceding gene: 156980301

Following gene: 156980299

Centisome position: 73.46

GC content: 36.09

Gene sequence:

>471_bases
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAACTAAATGATGATGATTTACCATTCTGA

Upstream 100 bases:

>100_bases
ACATTTAATTCATTTAAGTAGTCAAAATTCAAATGCAAAATACATTAAAAGTGAAATACAAAAAGTGACGGGCGCGCCCG
TTTATGTTGGAGGTTTATAA

Downstream 100 bases:

>100_bases
TTTAACCGGTTTGAAAGTGAGGTGTGTATATGACTGGTTGGATAAGTATTGATCGCTCAATTCAAAATCATTGGCTATTT
AAAGAAAAGAGAACATTTTC

Product: single-strand DNA-binding protein

Products: NA

Alternate protein names: SSB 1; Helix-destabilizing protein 1 [H]

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF

Sequences:

>Translated_156_residues
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF
>Mature_156_residues
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Escherichia coli, GI1790494, Length=173, Percent_Identity=30.635838150289, Blast_Score=75, Evalue=2e-15,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 17642; Mature: 17642

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAEN
CCCCEEEEEECCCCCCCEECCCCCCEEEEEEEEECEECCCCCCCCCCEEEEEEEECCHHH
VNKYLSKGSLAGVDGRLQTRNYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQV
HHHHHHCCCCCCCCCEEECCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHH
QQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF
HHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC
>Mature Secondary Structure
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAEN
CCCCEEEEEECCCCCCCEECCCCCCEEEEEEEEECEECCCCCCCCCCEEEEEEEECCHHH
VNKYLSKGSLAGVDGRLQTRNYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQV
HHHHHHCCCCCCCCCEEECCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHH
QQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF
HHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA