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The map label for this gene is 156980263

Identifier: 156980263

GI number: 156980263

Start: 2089010

End: 2089264

Strand: Reverse

Name: 156980263

Synonym: SAHV_1932

Alternate gene names: NA

Gene position: 2089264-2089010 (Counterclockwise)

Preceding gene: 156980264

Following gene: 156980262

Centisome position: 72.54

GC content: 32.55

Gene sequence:

>255_bases
ATGATTAATTGGAAAATTAGAATGAAACAAAAATCATTTTGGGTAGCGATATTGTCAGCTATCTTTTTATTTGCTCAAAA
CATCGCCAAAGCTATTGGGTATGATATTCAAGTTTATACAGAGCAATTAACAGACGGTTTAAACGCTATATTAGGATTTT
TAGTATTAACTGGTGTGATTCAAGACCCGACTACTAAAGGTATAGGTGATAGCCACCAAGCTTTAGAATATGAAGAACCA
AGAAGAAAATACTAG

Upstream 100 bases:

>100_bases
GTTGCCCTTTTTCTATATATAAATTAACACACCATAATATAAATATCAAATAGACGGCTTATTGGTCGTCTTTTTATTTT
GGATAAAAGGAGATAAGAAT

Downstream 100 bases:

>100_bases
GAGGTAAAATAATGAAAACATACAGTGAAGCAAGAGCAAGGTTACGTTGGTATCAAGGTAGATATATTGATTTTGACGGT
TGGTATGGTTACCAATGTGC

Product: holin-like protein

Products: NA

Alternate protein names: Holin Phage Phi LC3 Family

Number of amino acids: Translated: 84; Mature: 84

Protein sequence:

>84_residues
MINWKIRMKQKSFWVAILSAIFLFAQNIAKAIGYDIQVYTEQLTDGLNAILGFLVLTGVIQDPTTKGIGDSHQALEYEEP
RRKY

Sequences:

>Translated_84_residues
MINWKIRMKQKSFWVAILSAIFLFAQNIAKAIGYDIQVYTEQLTDGLNAILGFLVLTGVIQDPTTKGIGDSHQALEYEEP
RRKY
>Mature_84_residues
MINWKIRMKQKSFWVAILSAIFLFAQNIAKAIGYDIQVYTEQLTDGLNAILGFLVLTGVIQDPTTKGIGDSHQALEYEEP
RRKY

Specific function: Unknown

COG id: COG5546

COG function: function code S; Small integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9591; Mature: 9591

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINWKIRMKQKSFWVAILSAIFLFAQNIAKAIGYDIQVYTEQLTDGLNAILGFLVLTGVI
CCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QDPTTKGIGDSHQALEYEEPRRKY
CCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MINWKIRMKQKSFWVAILSAIFLFAQNIAKAIGYDIQVYTEQLTDGLNAILGFLVLTGVI
CCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QDPTTKGIGDSHQALEYEEPRRKY
CCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA