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The map label for this gene is rplP0

Identifier: 156937970

GI number: 156937970

Start: 1053502

End: 1054542

Strand: Direct

Name: rplP0

Synonym: Igni_1182

Alternate gene names: 156937970

Gene position: 1053502-1054542 (Clockwise)

Preceding gene: 156937969

Following gene: 156937972

Centisome position: 81.19

GC content: 58.5

Gene sequence:

>1041_bases
TTGAGCGCGATCACCGGCAGGGTCTCCACTTACCACAGGGAGAAGTTCCCCGAGTGGAAGGTAAAGCTGGTAAACGAGGT
AAAGGAGAAGCTGAAGGAGAACGACGTAGTGCTGGTACTGGACCTAGTGGAAACTCCAGCGAACTTGGTACACAAGTTTA
GGAAGAAGTTCAGGAAAGAGCTCCCCTACATGAAGGTAATAAAGAACAACTTGGTGAGGAAGGCGTTTGAACAGAGCGGC
ATTGAGATGCCTAAGGAGATGGATGAGCAACTGGTAGGCTCCAACATGTTCATATTCACTAACGACAACCCCTTCAAGCT
GGCCCTCAAGATATCTAAGTTCAGCATGCCCGCCCCCGCCAAGCCCGGCGACGTGGCCCAGAGCGAGATAGTGGTCCCGG
CCGGCGACACCGGCCTCACCCCGGGCCCCATACTCTCAACCTTCGGTAAGCTGAAGATCAAAACTATGGTCAAAGGGGGT
ACCATACACATCGCCAAGGACACTGTGGTAGCGAAGCCCGGGGACGTGATCTCGCCGGAGCTCGCGAGCCTCCTCCAGAA
GCTGGGCATAACGCCCATGGAGCTAAAGATGAAGATCAAGGGAGCTTACATAAAGAGCTTGAACAGGTGGGTGCCCGCAG
AGGAGCTGGTGCTCGACCTGAACAAGTACAAGGAGCAGATACAAGAAGCGTACACCAACGCGCTGGCCTTGGGAGTGAGC
ATAGCCTACCCGGTGCCGGAGGTGCTGAAGCTGAGCGTGGCGAAGGCGTTCCAGGACGCGCTGAAGGTAGCCGTGGAGGC
GGGCTGGCTCACCAAGGAGACCGCGCCGTACTTGCTCAGCAAGGCCTACGCGCAAGCGCTGGCGCTGGTGGGCGCTCTGG
GCGACAAGGCGAAGGAGCTCGGAATAGAGGTGGAGGTCCCGGCCGCGCCGGCGCCGGAGGCGAAGGAGGAGAAGAAGGAG
GAGGCGGAAGAGGAAGAAGAGGAGAAGAAGGAGGTCTCGGAGGAGGACCTCTCCGCGGGCCTCGGGGCGCTATTCGGCTA
A

Upstream 100 bases:

>100_bases
GGAGAGGAAGCTCCCCAACCCTCAAAACCAGATAGCTAAAGTTATAGTGAAGACCACGATGGGACCGCCGGTGCTCGTTC
TGAGCAGGAGGTGAAGGGCG

Downstream 100 bases:

>100_bases
CCTCCTCCTCTTCAAATACTCCTTTACTTTTTCCGAGAAGAACACCCCCCCTCCTATCACCGGGTACGCGTAGGGGAGCT
CTTCTACCACCTTCATGCCC

Product: acidic ribosomal protein P0

Products: NA

Alternate protein names: L10E

Number of amino acids: Translated: 346; Mature: 345

Protein sequence:

>346_residues
MSAITGRVSTYHREKFPEWKVKLVNEVKEKLKENDVVLVLDLVETPANLVHKFRKKFRKELPYMKVIKNNLVRKAFEQSG
IEMPKEMDEQLVGSNMFIFTNDNPFKLALKISKFSMPAPAKPGDVAQSEIVVPAGDTGLTPGPILSTFGKLKIKTMVKGG
TIHIAKDTVVAKPGDVISPELASLLQKLGITPMELKMKIKGAYIKSLNRWVPAEELVLDLNKYKEQIQEAYTNALALGVS
IAYPVPEVLKLSVAKAFQDALKVAVEAGWLTKETAPYLLSKAYAQALALVGALGDKAKELGIEVEVPAAPAPEAKEEKKE
EAEEEEEEKKEVSEEDLSAGLGALFG

Sequences:

>Translated_346_residues
MSAITGRVSTYHREKFPEWKVKLVNEVKEKLKENDVVLVLDLVETPANLVHKFRKKFRKELPYMKVIKNNLVRKAFEQSG
IEMPKEMDEQLVGSNMFIFTNDNPFKLALKISKFSMPAPAKPGDVAQSEIVVPAGDTGLTPGPILSTFGKLKIKTMVKGG
TIHIAKDTVVAKPGDVISPELASLLQKLGITPMELKMKIKGAYIKSLNRWVPAEELVLDLNKYKEQIQEAYTNALALGVS
IAYPVPEVLKLSVAKAFQDALKVAVEAGWLTKETAPYLLSKAYAQALALVGALGDKAKELGIEVEVPAAPAPEAKEEKKE
EAEEEEEEKKEVSEEDLSAGLGALFG
>Mature_345_residues
SAITGRVSTYHREKFPEWKVKLVNEVKEKLKENDVVLVLDLVETPANLVHKFRKKFRKELPYMKVIKNNLVRKAFEQSGI
EMPKEMDEQLVGSNMFIFTNDNPFKLALKISKFSMPAPAKPGDVAQSEIVVPAGDTGLTPGPILSTFGKLKIKTMVKGGT
IHIAKDTVVAKPGDVISPELASLLQKLGITPMELKMKIKGAYIKSLNRWVPAEELVLDLNKYKEQIQEAYTNALALGVSI
AYPVPEVLKLSVAKAFQDALKVAVEAGWLTKETAPYLLSKAYAQALALVGALGDKAKELGIEVEVPAAPAPEAKEEKKEE
AEEEEEEKKEVSEEDLSAGLGALFG

Specific function: Ribosomal protein P0 is the functional equivalent of E.coli protein L10

COG id: COG0244

COG function: function code J; Ribosomal protein L10

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L10P family

Homologues:

Organism=Caenorhabditis elegans, GI17506815, Length=254, Percent_Identity=24.4094488188976, Blast_Score=75, Evalue=7e-14,
Organism=Saccharomyces cerevisiae, GI6323371, Length=261, Percent_Identity=27.2030651340996, Blast_Score=63, Evalue=8e-11,
Organism=Drosophila melanogaster, GI17737731, Length=254, Percent_Identity=27.1653543307087, Blast_Score=83, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RLA0_IGNH4 (A8ABQ7)

Other databases:

- EMBL:   CP000816
- RefSeq:   YP_001435766.1
- ProteinModelPortal:   A8ABQ7
- SMR:   A8ABQ7
- STRING:   A8ABQ7
- GeneID:   5562883
- GenomeReviews:   CP000816_GR
- KEGG:   iho:Igni_1182
- eggNOG:   arNOG04753
- HOGENOM:   HBG731512
- OMA:   KGPTSFK
- ProtClustDB:   PRK04019
- BioCyc:   IHOS453591:IGNI_1182-MONOMER
- GO:   GO:0005840
- HAMAP:   MF_00280
- InterPro:   IPR001790
- InterPro:   IPR022909

Pfam domain/function: PF00466 Ribosomal_L10

EC number: NA

Molecular weight: Translated: 38012; Mature: 37881

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAITGRVSTYHREKFPEWKVKLVNEVKEKLKENDVVLVLDLVETPANLVHKFRKKFRKE
CCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEEHHHCCHHHHHHHHHHHHHH
LPYMKVIKNNLVRKAFEQSGIEMPKEMDEQLVGSNMFIFTNDNPFKLALKISKFSMPAPA
CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEECCCCEEEEEEEEECCCCCCC
KPGDVAQSEIVVPAGDTGLTPGPILSTFGKLKIKTMVKGGTIHIAKDTVVAKPGDVISPE
CCCCCCCCCEEEECCCCCCCCCHHHHHHCCEEEEEEECCCEEEEECCEEEECCCCCCCHH
LASLLQKLGITPMELKMKIKGAYIKSLNRWVPAEELVLDLNKYKEQIQEAYTNALALGVS
HHHHHHHHCCCCHHEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAYPVPEVLKLSVAKAFQDALKVAVEAGWLTKETAPYLLSKAYAQALALVGALGDKAKEL
ECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHC
GIEVEVPAAPAPEAKEEKKEEAEEEEEEKKEVSEEDLSAGLGALFG
CCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SAITGRVSTYHREKFPEWKVKLVNEVKEKLKENDVVLVLDLVETPANLVHKFRKKFRKE
CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEEHHHCCHHHHHHHHHHHHHH
LPYMKVIKNNLVRKAFEQSGIEMPKEMDEQLVGSNMFIFTNDNPFKLALKISKFSMPAPA
CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEECCCCEEEEEEEEECCCCCCC
KPGDVAQSEIVVPAGDTGLTPGPILSTFGKLKIKTMVKGGTIHIAKDTVVAKPGDVISPE
CCCCCCCCCEEEECCCCCCCCCHHHHHHCCEEEEEEECCCEEEEECCEEEECCCCCCCHH
LASLLQKLGITPMELKMKIKGAYIKSLNRWVPAEELVLDLNKYKEQIQEAYTNALALGVS
HHHHHHHHCCCCHHEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAYPVPEVLKLSVAKAFQDALKVAVEAGWLTKETAPYLLSKAYAQALALVGALGDKAKEL
ECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHC
GIEVEVPAAPAPEAKEEKKEEAEEEEEEKKEVSEEDLSAGLGALFG
CCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA