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The map label for this gene is dpa [H]

Identifier: 156937965

GI number: 156937965

Start: 1050642

End: 1051664

Strand: Direct

Name: dpa [H]

Synonym: Igni_1177

Alternate gene names: 156937965

Gene position: 1050642-1051664 (Clockwise)

Preceding gene: 156937964

Following gene: 156937966

Centisome position: 80.97

GC content: 55.03

Gene sequence:

>1023_bases
TTGCTGGGGCGCCTAAAGAAGGCACTCAAGGGACTGGTCAACGAGGTAGCTAAGAGTACCAAGGAAGTAACCGAGGAGAA
GCCGGTAACCCCGGAGGAGAGGCCGAAGGAAAAGAAGGAGGAGAAGAAGGGCCTTTTAACGAAGTTAAAGGACACAATAG
TTTATAAAGAAATAGACGTAAAGAAGCTAGAGCCTCTCCTGGAGGAGTACGTACTGACGTTGAGCGAGCTGGACGTGGCC
TACGAAGTCGCGGAGGAATTGATAGAAAACTTCAAGAAGAACTTAGCCGGCTTGAAAATAAAGAGGGGGGTCGACGAGAG
GGAAGTGATTGAGAAGGCGTTAAAAGATGCAATTCTGGGCTTGATAAGCGTACCCGCGTTCGACTTGATCGAGGAGGCCA
AGCGGGCCCAGAGGGAGGGCCGGATACTTAAAATCATGTTCATGGGTGTTAACGGAGTTGGGAAGACCACGACCATAGCC
AAGGTCGCTTACGCGATGAAGAGGGCCGGGGTCACCCCGGTGCTGGCGGCCGCGGACACCTTTAGGGCCGGGGCGGTGGA
GCAGCTCAAGGTACACGCGGAGAGGATGGGGGTACCAATAATAACCAAGCCCTACGGGAGCGACCCGGCGTCCGTGGCCT
ACGACGCTATAGAGTACGCCAAGGCGAGGGGGTTTAACGTAGTTTTGATAGACACTGCCGGGAGGATGCACGTAGACGTG
GACTTGATGAACGAGCTCCGGAAGGTCGCTAGGGTCGCAGAGCCGGACTACAAGGTCTTAGTCTTGGACGCCTTAACCGG
CAACGACGCAGTCGAACAAGCGAAGTTCTTTGACGAGGCCGTGGGCGTCGACGCTGTAATATTGACTAAGGTGGACGCAG
ACGCCAAGGGGGGAGCGGTCTTGAGCGTCGCAGCTACCATAAAGAAGCCCGTCCTATACTTGGGCGTAGGCCAGAACTAT
GAGGACTTGATAAAGTTCGACCCCAAGTGGTTCGTGGAGCGGCTGTTGGGTGAGGAGAAGTGA

Upstream 100 bases:

>100_bases
GAAGAGCAGCTGAAGCTCCTCGAAGCAGAGCTGGCTAAGGTGACCCAAGCGCTGACTTCAATAGAAGCCAGGGTCGCCGA
GATCTACCGGGAACTGAACG

Downstream 100 bases:

>100_bases
AGGACTTGAACCGCTACCTAGAGCAGTTGAGGAACTTGATGAACGACTGGAGGACCATATTGGCCTTGGCGAGCAAGCCC
GACGAGGACGAGTTCAAGAC

Product: signal recognition particle-docking protein FtsY

Products: NA

Alternate protein names: Docking protein; P41 [H]

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MLGRLKKALKGLVNEVAKSTKEVTEEKPVTPEERPKEKKEEKKGLLTKLKDTIVYKEIDVKKLEPLLEEYVLTLSELDVA
YEVAEELIENFKKNLAGLKIKRGVDEREVIEKALKDAILGLISVPAFDLIEEAKRAQREGRILKIMFMGVNGVGKTTTIA
KVAYAMKRAGVTPVLAAADTFRAGAVEQLKVHAERMGVPIITKPYGSDPASVAYDAIEYAKARGFNVVLIDTAGRMHVDV
DLMNELRKVARVAEPDYKVLVLDALTGNDAVEQAKFFDEAVGVDAVILTKVDADAKGGAVLSVAATIKKPVLYLGVGQNY
EDLIKFDPKWFVERLLGEEK

Sequences:

>Translated_340_residues
MLGRLKKALKGLVNEVAKSTKEVTEEKPVTPEERPKEKKEEKKGLLTKLKDTIVYKEIDVKKLEPLLEEYVLTLSELDVA
YEVAEELIENFKKNLAGLKIKRGVDEREVIEKALKDAILGLISVPAFDLIEEAKRAQREGRILKIMFMGVNGVGKTTTIA
KVAYAMKRAGVTPVLAAADTFRAGAVEQLKVHAERMGVPIITKPYGSDPASVAYDAIEYAKARGFNVVLIDTAGRMHVDV
DLMNELRKVARVAEPDYKVLVLDALTGNDAVEQAKFFDEAVGVDAVILTKVDADAKGGAVLSVAATIKKPVLYLGVGQNY
EDLIKFDPKWFVERLLGEEK
>Mature_340_residues
MLGRLKKALKGLVNEVAKSTKEVTEEKPVTPEERPKEKKEEKKGLLTKLKDTIVYKEIDVKKLEPLLEEYVLTLSELDVA
YEVAEELIENFKKNLAGLKIKRGVDEREVIEKALKDAILGLISVPAFDLIEEAKRAQREGRILKIMFMGVNGVGKTTTIA
KVAYAMKRAGVTPVLAAADTFRAGAVEQLKVHAERMGVPIITKPYGSDPASVAYDAIEYAKARGFNVVLIDTAGRMHVDV
DLMNELRKVARVAEPDYKVLVLDALTGNDAVEQAKFFDEAVGVDAVILTKVDADAKGGAVLSVAATIKKPVLYLGVGQNY
EDLIKFDPKWFVERLLGEEK

Specific function: Probably involved in the signal sequence recognition [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI295424842, Length=328, Percent_Identity=33.2317073170732, Blast_Score=176, Evalue=2e-44,
Organism=Homo sapiens, GI23308697, Length=328, Percent_Identity=33.2317073170732, Blast_Score=176, Evalue=2e-44,
Organism=Homo sapiens, GI4507215, Length=290, Percent_Identity=35.5172413793103, Blast_Score=169, Evalue=3e-42,
Organism=Homo sapiens, GI226371618, Length=239, Percent_Identity=37.2384937238494, Blast_Score=155, Evalue=5e-38,
Organism=Homo sapiens, GI89061728, Length=130, Percent_Identity=37.6923076923077, Blast_Score=100, Evalue=4e-21,
Organism=Escherichia coli, GI1789874, Length=201, Percent_Identity=48.2587064676617, Blast_Score=186, Evalue=2e-48,
Organism=Escherichia coli, GI1788963, Length=273, Percent_Identity=33.6996336996337, Blast_Score=152, Evalue=3e-38,
Organism=Caenorhabditis elegans, GI17539958, Length=284, Percent_Identity=36.9718309859155, Blast_Score=179, Evalue=2e-45,
Organism=Caenorhabditis elegans, GI193206261, Length=313, Percent_Identity=35.1437699680511, Blast_Score=167, Evalue=5e-42,
Organism=Saccharomyces cerevisiae, GI6325345, Length=276, Percent_Identity=34.0579710144928, Blast_Score=166, Evalue=3e-42,
Organism=Saccharomyces cerevisiae, GI6320498, Length=320, Percent_Identity=34.0625, Blast_Score=154, Evalue=2e-38,
Organism=Drosophila melanogaster, GI24641198, Length=330, Percent_Identity=33.3333333333333, Blast_Score=175, Evalue=4e-44,
Organism=Drosophila melanogaster, GI17647949, Length=284, Percent_Identity=33.8028169014084, Blast_Score=163, Evalue=1e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 37480; Mature: 37480

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGRLKKALKGLVNEVAKSTKEVTEEKPVTPEERPKEKKEEKKGLLTKLKDTIVYKEIDV
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCH
KKLEPLLEEYVLTLSELDVAYEVAEELIENFKKNLAGLKIKRGVDEREVIEKALKDAILG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHH
LISVPAFDLIEEAKRAQREGRILKIMFMGVNGVGKTTTIAKVAYAMKRAGVTPVLAAADT
HHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH
FRAGAVEQLKVHAERMGVPIITKPYGSDPASVAYDAIEYAKARGFNVVLIDTAGRMHVDV
HHCCHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEH
DLMNELRKVARVAEPDYKVLVLDALTGNDAVEQAKFFDEAVGVDAVILTKVDADAKGGAV
HHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEE
LSVAATIKKPVLYLGVGQNYEDLIKFDPKWFVERLLGEEK
EEHHHHHHCCEEEEECCCCHHHHHHCCHHHHHHHHHCCCC
>Mature Secondary Structure
MLGRLKKALKGLVNEVAKSTKEVTEEKPVTPEERPKEKKEEKKGLLTKLKDTIVYKEIDV
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCH
KKLEPLLEEYVLTLSELDVAYEVAEELIENFKKNLAGLKIKRGVDEREVIEKALKDAILG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHH
LISVPAFDLIEEAKRAQREGRILKIMFMGVNGVGKTTTIAKVAYAMKRAGVTPVLAAADT
HHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH
FRAGAVEQLKVHAERMGVPIITKPYGSDPASVAYDAIEYAKARGFNVVLIDTAGRMHVDV
HHCCHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEH
DLMNELRKVARVAEPDYKVLVLDALTGNDAVEQAKFFDEAVGVDAVILTKVDADAKGGAV
HHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEE
LSVAATIKKPVLYLGVGQNYEDLIKFDPKWFVERLLGEEK
EEHHHHHHCCEEEEECCCCHHHHHHCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1658539; 8935656 [H]