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The map label for this gene is rplX [H]

Identifier: 156937963

GI number: 156937963

Start: 1049922

End: 1050236

Strand: Direct

Name: rplX [H]

Synonym: Igni_1175

Alternate gene names: 156937963

Gene position: 1049922-1050236 (Clockwise)

Preceding gene: 156937959

Following gene: 156937964

Centisome position: 80.92

GC content: 57.78

Gene sequence:

>315_bases
GTGAGCGACGTCAAGTTCTTCAAGATTAGGGGCTATATGCTGGTATCGCACGACAAGAACCCGAGGTGGCAGGCCTTCGA
GGTGGTGAGGAGGGGGACCAAGCCCGAGGAGGTAGTGGAGAGGGTGCTCTCCGAGCTCGGCAGCAGGCACAAGCTGAAGA
GGTACCACATAAGGGTTGAGAACGTACAAGAGGTGAAGGAGGAGGAGATAGAGGACATCTACTTCCTCCAGCTGGCCCAC
TTGAACAGCTGGGAGGCCTACGACGCCCACAAGGTCTGGAGGAAGTACAAGCTGGGCTGGGGTGCGTGGAAGTGA

Upstream 100 bases:

>100_bases
GGTCCCTCAAACGATGCCTACCGGGGCCCCTTAGGGAGGGACGCTAATGAGGTGTGAGCCATTAAAAAGCCCCCAAGGGG
GCCGCTGAGGGGTAACGAAC

Downstream 100 bases:

>100_bases
ACGTCCCCCAAGAGAAGCTGGAGGAGCTCCAGAAGCTCCAAAGGGAGTACGAACAGCTCCGGGCCCTACAAGCCAGCCTC
GCGGTCGAGGTGGAGCGCCT

Product: 50S ribosomal protein LX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 103

Protein sequence:

>104_residues
MSDVKFFKIRGYMLVSHDKNPRWQAFEVVRRGTKPEEVVERVLSELGSRHKLKRYHIRVENVQEVKEEEIEDIYFLQLAH
LNSWEAYDAHKVWRKYKLGWGAWK

Sequences:

>Translated_104_residues
MSDVKFFKIRGYMLVSHDKNPRWQAFEVVRRGTKPEEVVERVLSELGSRHKLKRYHIRVENVQEVKEEEIEDIYFLQLAH
LNSWEAYDAHKVWRKYKLGWGAWK
>Mature_103_residues
SDVKFFKIRGYMLVSHDKNPRWQAFEVVRRGTKPEEVVERVLSELGSRHKLKRYHIRVENVQEVKEEEIEDIYFLQLAHL
NSWEAYDAHKVWRKYKLGWGAWK

Specific function: Unknown

COG id: COG2157

COG function: function code J; Ribosomal protein L20A (L18A)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein LX family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021138
- InterPro:   IPR002768
- ProDom:   PD010302 [H]

Pfam domain/function: PF01775 Ribosomal_L18ae [H]

EC number: NA

Molecular weight: Translated: 12674; Mature: 12542

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDVKFFKIRGYMLVSHDKNPRWQAFEVVRRGTKPEEVVERVLSELGSRHKLKRYHIRVE
CCCCEEEEEEEEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHEEHH
NVQEVKEEEIEDIYFLQLAHLNSWEAYDAHKVWRKYKLGWGAWK
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SDVKFFKIRGYMLVSHDKNPRWQAFEVVRRGTKPEEVVERVLSELGSRHKLKRYHIRVE
CCCEEEEEEEEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHEEHH
NVQEVKEEEIEDIYFLQLAHLNSWEAYDAHKVWRKYKLGWGAWK
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10382966 [H]