Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
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Accession | NC_009776 |
Length | 1,297,538 |
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The map label for this gene is rmlA2 [C]
Identifier: 156937947
GI number: 156937947
Start: 1035246
End: 1035944
Strand: Direct
Name: rmlA2 [C]
Synonym: Igni_1159
Alternate gene names: 156937947
Gene position: 1035246-1035944 (Clockwise)
Preceding gene: 156937944
Following gene: 156937948
Centisome position: 79.79
GC content: 53.51
Gene sequence:
>699_bases GTGAAGGCGTTGATACTCGCCGGGGGGTACGGCAAGAGGCTGAAGCCCCTCACCGAGGAGTTGCCGAAGCCCTTGCTCCA AGTGGCGGGGAAGCCCATAGTGGCGTGGCAATTCGACCTATACAAGAGACACGGAATAAATGAAATAGTTATGGCAGTGG GCTACTTGAAGGAAAAAGTAATAGAATTGGTCGGCTCGGGCAGCAAGTACGGCGTGAAGGTAGTTTACGTCGTCGAGGAG GAGCCCTTGGGGACCGGAGGGGCCATAAAGAACGCTGAGAGCGCGTTGAGAAACGAAGAGATGTTCGCAGTTTCCAACGG AGATATAATAACGAACTTGGACGTCACCAAGCTCTGCGACGCGTTGAGGGAGAGCGAGGCGGTAGCGGCCATGTCGCTGG TCCCCCTACCCTCCCCCTACGGAATAGTGATAACTGATGAGAGTGGGAAAGTTAAGGAATTCAAGGAGAAACCGAAGATA CACGACTACTGGATAAACGCCGGGGTATATTGTATGAGGAACGAGATATTCGATTACTTACCCGAGAGCGGGGACATAGA GAAGACCGCTTTCCCCCAGCTCGCCAAGGAGGGGAAGCTGGTGGCCGTTAAGTACCCGGACGCCTTCTGGAAGAGCGTGG ACACGTTTAAGGACTTAGAGGAGGCCAACAAACTGTTGTCGAAGTTGAGCTTGTTCTGA
Upstream 100 bases:
>100_bases CCCAATATGACTAGCCCTCTCCTCAACCCCTTAATACCTCCTTTACCACAACGCGAGAACCAAAATTAATGCTCGCATAG GCTCCAGTACGGTGGCCTCC
Downstream 100 bases:
>100_bases GGTGAGAAGCTTGGACGAGAGGCTGGTGGCTTCCCTCTCCGGGGCCCTCTGCGGGGCCTTCGCCGCGCTGGGGGCACTGT CCTTGAGCTCCGGCTGGGAG
Product: nucleotidyl transferase
Products: NA
Alternate protein names: UDP-N-acetylglucosamine pyrophosphorylase; N-acetylglucosamine-1-phosphate uridyltransferase; Glucosamine-1-phosphate N-acetyltransferase [H]
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MKALILAGGYGKRLKPLTEELPKPLLQVAGKPIVAWQFDLYKRHGINEIVMAVGYLKEKVIELVGSGSKYGVKVVYVVEE EPLGTGGAIKNAESALRNEEMFAVSNGDIITNLDVTKLCDALRESEAVAAMSLVPLPSPYGIVITDESGKVKEFKEKPKI HDYWINAGVYCMRNEIFDYLPESGDIEKTAFPQLAKEGKLVAVKYPDAFWKSVDTFKDLEEANKLLSKLSLF
Sequences:
>Translated_232_residues MKALILAGGYGKRLKPLTEELPKPLLQVAGKPIVAWQFDLYKRHGINEIVMAVGYLKEKVIELVGSGSKYGVKVVYVVEE EPLGTGGAIKNAESALRNEEMFAVSNGDIITNLDVTKLCDALRESEAVAAMSLVPLPSPYGIVITDESGKVKEFKEKPKI HDYWINAGVYCMRNEIFDYLPESGDIEKTAFPQLAKEGKLVAVKYPDAFWKSVDTFKDLEEANKLLSKLSLF >Mature_232_residues MKALILAGGYGKRLKPLTEELPKPLLQVAGKPIVAWQFDLYKRHGINEIVMAVGYLKEKVIELVGSGSKYGVKVVYVVEE EPLGTGGAIKNAESALRNEEMFAVSNGDIITNLDVTKLCDALRESEAVAAMSLVPLPSPYGIVITDESGKVKEFKEKPKI HDYWINAGVYCMRNEIFDYLPESGDIEKTAFPQLAKEGKLVAVKYPDAFWKSVDTFKDLEEANKLLSKLSLF
Specific function: Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetyl-glucosamine (UDP- GlcNAc). Responsible for the acetylation of GlcN-1-P to GlcNAc-1- P, and for the uridyl transfer from UTP to GlcNAc-1-P, to produce UDP-GlcN
COG id: COG1208
COG function: function code MJ; Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Homo sapiens, GI11761621, Length=239, Percent_Identity=33.4728033472803, Blast_Score=124, Evalue=7e-29, Organism=Homo sapiens, GI11761619, Length=239, Percent_Identity=33.4728033472803, Blast_Score=124, Evalue=8e-29, Organism=Homo sapiens, GI31881779, Length=266, Percent_Identity=26.3157894736842, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI45447090, Length=266, Percent_Identity=26.3157894736842, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI262205273, Length=221, Percent_Identity=24.4343891402715, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI9966779, Length=221, Percent_Identity=24.4343891402715, Blast_Score=66, Evalue=2e-11, Organism=Escherichia coli, GI1790224, Length=244, Percent_Identity=27.4590163934426, Blast_Score=74, Evalue=7e-15, Organism=Escherichia coli, GI1788351, Length=239, Percent_Identity=26.7782426778243, Blast_Score=72, Evalue=3e-14, Organism=Caenorhabditis elegans, GI133931050, Length=238, Percent_Identity=37.8151260504202, Blast_Score=142, Evalue=1e-34, Organism=Caenorhabditis elegans, GI17509979, Length=245, Percent_Identity=28.1632653061224, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17509981, Length=233, Percent_Identity=28.3261802575107, Blast_Score=78, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6320148, Length=229, Percent_Identity=36.6812227074236, Blast_Score=125, Evalue=7e-30, Organism=Drosophila melanogaster, GI21355443, Length=226, Percent_Identity=36.283185840708, Blast_Score=126, Evalue=1e-29, Organism=Drosophila melanogaster, GI24644084, Length=226, Percent_Identity=36.283185840708, Blast_Score=126, Evalue=1e-29, Organism=Drosophila melanogaster, GI24653912, Length=199, Percent_Identity=29.6482412060301, Blast_Score=83, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005835 - InterPro: IPR011004 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.23; =2.3.1.157 [H]
Molecular weight: Translated: 25702; Mature: 25702
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKALILAGGYGKRLKPLTEELPKPLLQVAGKPIVAWQFDLYKRHGINEIVMAVGYLKEKV CCEEEEECCCCCCCCHHHHHCCHHHHHHCCCCEEEEEHHHHHHCCHHHHHHHHHHHHHHH IELVGSGSKYGVKVVYVVEEEPLGTGGAIKNAESALRNEEMFAVSNGDIITNLDVTKLCD HHHHCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHCCCCEEEEECCCEEECCCHHHHHH ALRESEAVAAMSLVPLPSPYGIVITDESGKVKEFKEKPKIHDYWINAGVYCMRNEIFDYL HHHHHHHHHHHEEECCCCCCEEEEECCCCCHHHHHHCCCCEEEEECCCHHHHHHHHHHHC PESGDIEKTAFPQLAKEGKLVAVKYPDAFWKSVDTFKDLEEANKLLSKLSLF CCCCCCCHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKALILAGGYGKRLKPLTEELPKPLLQVAGKPIVAWQFDLYKRHGINEIVMAVGYLKEKV CCEEEEECCCCCCCCHHHHHCCHHHHHHCCCCEEEEEHHHHHHCCHHHHHHHHHHHHHHH IELVGSGSKYGVKVVYVVEEEPLGTGGAIKNAESALRNEEMFAVSNGDIITNLDVTKLCD HHHHCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHCCCCEEEEECCCEEECCCHHHHHH ALRESEAVAAMSLVPLPSPYGIVITDESGKVKEFKEKPKIHDYWINAGVYCMRNEIFDYL HHHHHHHHHHHEEECCCCCCEEEEECCCCCHHHHHHCCCCEEEEECCCHHHHHHHHHHHC PESGDIEKTAFPQLAKEGKLVAVKYPDAFWKSVDTFKDLEEANKLLSKLSLF CCCCCCCHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA