Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
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Accession | NC_009776 |
Length | 1,297,538 |
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The map label for this gene is 156937914
Identifier: 156937914
GI number: 156937914
Start: 1005257
End: 1005928
Strand: Direct
Name: 156937914
Synonym: Igni_1126
Alternate gene names: NA
Gene position: 1005257-1005928 (Clockwise)
Preceding gene: 156937913
Following gene: 156937918
Centisome position: 77.47
GC content: 59.52
Gene sequence:
>672_bases TTGAGCGACCTAGCGACGGGAAACGCAGCCTTGAAAGGGTGTGACCCGTTTGAGTGGAAGAGGGCCTTGGAGGAGAAGAA CTGGAAGTGCGAGCCAGAGAACCTCGAAGAAGCCTTGGAGGTCCAGAGGAAGGTAGCTGAGGTCGCGAAGGAGGTTTGGG GGCCCGTTACGGGCTGGAAGGTGGGCCTCACCGGGGAGGAGAGCAAGAGGAAGTTCGGCGGCGGGCCCATAACCGGGCCC CTCTTCCGAGACGGCCTCTTGGGCAACGGGAGCTCCGTGGAGCTGGCCAAGCTCAGCGACCCCTTAGCGGAGCCAGAGAT ATTCTTCTGCGACGGCTCCTTCTTTCTAGCAATAGAAATTCCGGACAACCGTTACGGCAAGCGGTGGGACGAGCTGAACT GGCTCATGCTGCTCGCCGACCTAGCTGCCTCCAACAAGGTGGTGGTCGGGAAGGAGGTAGAGTTGAGGGACGGCGAGGAG GTGAGGGTCAGCGGCCCCGGAGTGAACTTGGTGGGAAGGATAGACATGAAGAGGATAAACGCCAACGTAGAGTTGTTGAA GGACAAGGAAGGCTGCCTGCTCTTGGGGACTGTAGCAGATCCCTTCAAGCCCACGGCCGGGGAGTACGTGATGGAGTGTT GCGGGGGGAGAGCAACGGTCAAGTTCATTTAA
Upstream 100 bases:
>100_bases TCATATTCTTGGGGGGTAAGGACAGCCAGTACAACCAAGTGGGCGAGTCCGTGCCACCCCCCTTGGCTAAGGCCATAGCT GAGGAAGCGCTCAAATTCCT
Downstream 100 bases:
>100_bases ACTTCTACGATACCCTTTGCGAATTCGGTTAATGTGTACTTAACAGAATATAGCGCGTCAAAGGACTCTAAGCTCAGACC CCCCTCGAGGTCCAGCCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MSDLATGNAALKGCDPFEWKRALEEKNWKCEPENLEEALEVQRKVAEVAKEVWGPVTGWKVGLTGEESKRKFGGGPITGP LFRDGLLGNGSSVELAKLSDPLAEPEIFFCDGSFFLAIEIPDNRYGKRWDELNWLMLLADLAASNKVVVGKEVELRDGEE VRVSGPGVNLVGRIDMKRINANVELLKDKEGCLLLGTVADPFKPTAGEYVMECCGGRATVKFI
Sequences:
>Translated_223_residues MSDLATGNAALKGCDPFEWKRALEEKNWKCEPENLEEALEVQRKVAEVAKEVWGPVTGWKVGLTGEESKRKFGGGPITGP LFRDGLLGNGSSVELAKLSDPLAEPEIFFCDGSFFLAIEIPDNRYGKRWDELNWLMLLADLAASNKVVVGKEVELRDGEE VRVSGPGVNLVGRIDMKRINANVELLKDKEGCLLLGTVADPFKPTAGEYVMECCGGRATVKFI >Mature_222_residues SDLATGNAALKGCDPFEWKRALEEKNWKCEPENLEEALEVQRKVAEVAKEVWGPVTGWKVGLTGEESKRKFGGGPITGPL FRDGLLGNGSSVELAKLSDPLAEPEIFFCDGSFFLAIEIPDNRYGKRWDELNWLMLLADLAASNKVVVGKEVELRDGEEV RVSGPGVNLVGRIDMKRINANVELLKDKEGCLLLGTVADPFKPTAGEYVMECCGGRATVKFI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24445; Mature: 24314
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLATGNAALKGCDPFEWKRALEEKNWKCEPENLEEALEVQRKVAEVAKEVWGPVTGWK CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEE VGLTGEESKRKFGGGPITGPLFRDGLLGNGSSVELAKLSDPLAEPEIFFCDGSFFLAIEI EECCCCHHHHHCCCCCCCCHHHHCCCCCCCCCEEEHCCCCCCCCCEEEEECCCEEEEEEC PDNRYGKRWDELNWLMLLADLAASNKVVVGKEVELRDGEEVRVSGPGVNLVGRIDMKRIN CCCCCCCCHHHHHHHHHHHHHHCCCEEEECCEEECCCCCEEEEECCCEEEEEEEEEEEEC ANVELLKDKEGCLLLGTVADPFKPTAGEYVMECCGGRATVKFI CCEEEEECCCCEEEEECCCCCCCCCHHHHHHHHCCCCEEEEEC >Mature Secondary Structure SDLATGNAALKGCDPFEWKRALEEKNWKCEPENLEEALEVQRKVAEVAKEVWGPVTGWK CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEE VGLTGEESKRKFGGGPITGPLFRDGLLGNGSSVELAKLSDPLAEPEIFFCDGSFFLAIEI EECCCCHHHHHCCCCCCCCHHHHCCCCCCCCCEEEHCCCCCCCCCEEEEECCCEEEEEEC PDNRYGKRWDELNWLMLLADLAASNKVVVGKEVELRDGEEVRVSGPGVNLVGRIDMKRIN CCCCCCCCHHHHHHHHHHHHHHCCCEEEECCEEECCCCCEEEEECCCEEEEEEEEEEEEC ANVELLKDKEGCLLLGTVADPFKPTAGEYVMECCGGRATVKFI CCEEEEECCCCEEEEECCCCCCCCCHHHHHHHHCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA