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The map label for this gene is rpl44e [H]

Identifier: 156937894

GI number: 156937894

Start: 986935

End: 987210

Strand: Direct

Name: rpl44e [H]

Synonym: Igni_1106

Alternate gene names: 156937894

Gene position: 986935-987210 (Clockwise)

Preceding gene: 156937892

Following gene: 156937896

Centisome position: 76.06

GC content: 57.97

Gene sequence:

>276_bases
GTGAAGGTCCCCAAGGAGATAGTTAGGTACTGTCCGCGCTGTAAGACCCACACGCCCCACGCGGTGAGCTTGTACAAGCA
CGGCAAGAGGAGGGCGCTGGCCCAAGGAGAGAGGAGGTACAGGAGGAAGCAAGAGGGTTACGGCTCCCAGAGGAAGCCGG
AGCAGAAGAGGTTCGCCAAGGTCACCAAGAACCAAGTGGTAAAGCTGAGGTGCAAGAACTGCGGCTACACGCTGATGTAC
AACTTCGGGAGGCTCAAGAAGCTGGAGCTCGTCTGA

Upstream 100 bases:

>100_bases
TCCAACCCGTCCAACCCCAGCCGGGCGACCCATGGGAGGTATTGAGTGGAGGGCGGTGCCCTTATTTTTCGCTCCCGCTT
GGGGCCCTCGGGGAGGAAGA

Downstream 100 bases:

>100_bases
GCGGGCACAGCGGGTCCCCCTCGAACCCTGCCCCGGAGGCCAGCGCCCTCGCGAAGCACCCTCCCATGCAGTTCTTGTAG
TAGGGGCACTCGCACCCTCC

Product: 50S ribosomal protein L44e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 91; Mature: 91

Protein sequence:

>91_residues
MKVPKEIVRYCPRCKTHTPHAVSLYKHGKRRALAQGERRYRRKQEGYGSQRKPEQKRFAKVTKNQVVKLRCKNCGYTLMY
NFGRLKKLELV

Sequences:

>Translated_91_residues
MKVPKEIVRYCPRCKTHTPHAVSLYKHGKRRALAQGERRYRRKQEGYGSQRKPEQKRFAKVTKNQVVKLRCKNCGYTLMY
NFGRLKKLELV
>Mature_91_residues
MKVPKEIVRYCPRCKTHTPHAVSLYKHGKRRALAQGERRYRRKQEGYGSQRKPEQKRFAKVTKNQVVKLRCKNCGYTLMY
NFGRLKKLELV

Specific function: Unknown

COG id: COG1631

COG function: function code J; Ribosomal protein L44E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L44e family [H]

Homologues:

Organism=Homo sapiens, GI10445223, Length=92, Percent_Identity=45.6521739130435, Blast_Score=71, Evalue=2e-13,
Organism=Homo sapiens, GI4506651, Length=92, Percent_Identity=45.6521739130435, Blast_Score=70, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17531725, Length=91, Percent_Identity=41.7582417582418, Blast_Score=67, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24582672, Length=88, Percent_Identity=44.3181818181818, Blast_Score=71, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000552
- InterPro:   IPR011332
- ProDom:   PD002841 [H]

Pfam domain/function: PF00935 Ribosomal_L44 [H]

EC number: NA

Molecular weight: Translated: 10868; Mature: 10868

Theoretical pI: Translated: 11.18; Mature: 11.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVPKEIVRYCPRCKTHTPHAVSLYKHGKRRALAQGERRYRRKQEGYGSQRKPEQKRFAK
CCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
VTKNQVVKLRCKNCGYTLMYNFGRLKKLELV
HHHHHHEEEEECCCCEEEEECCCCCEEECCC
>Mature Secondary Structure
MKVPKEIVRYCPRCKTHTPHAVSLYKHGKRRALAQGERRYRRKQEGYGSQRKPEQKRFAK
CCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
VTKNQVVKLRCKNCGYTLMYNFGRLKKLELV
HHHHHHEEEEECCCCEEEEECCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10382966 [H]