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The map label for this gene is asnC [C]

Identifier: 156937288

GI number: 156937288

Start: 441761

End: 442219

Strand: Reverse

Name: asnC [C]

Synonym: Igni_0494

Alternate gene names: 156937288

Gene position: 442219-441761 (Counterclockwise)

Preceding gene: 156937301

Following gene: 156937286

Centisome position: 34.08

GC content: 47.28

Gene sequence:

>459_bases
ATGAGGGGCCATAAGGATTTGGACGAGCTGGACTATAAGATCCTCTCCTTACTGATGGAGAACGCCCGCAAGGGGGTTAG
GGAGATAGCGAGAGAGCTCAACGTGTCCCCCGCGACGGTCCACAACCGCTTGAAGAAGATGCTCTCAAAAGGGATAATAA
AGGGGTTCGTGCCGCTGATGGACTTCTCCGTCCTAGGGTACCAAGTGACCGCAATAATAATGTTGAGCGTCGAAGGCTCA
AAATTGAAGGAATTGGAGGAGGAGCTGAAAAACATAAAAAACGTAATTGCTATATATGACATAACCGGAGATTACGATGT
ACTGTTGATTGCTAAGTTTAAGGACGTGAAGGCTTTAGACTTCTTCGTTAAGGATTTGCTAGAGAGGAAGGAGATCAAGA
AGAGCGTCACCCACATAGCTTTCAACGTGGTCAAGGAGGACTTCAGGGTTCCCCTTTAG

Upstream 100 bases:

>100_bases
GCCGGTCCACGGCAGCTCCGCGAAGGACGCTATAGTGAACGCCTCCATATAATTCTTCAGTCTCACGAGGCTCTCCCGAG
GACCGGAGCTGAAGGGGATT

Downstream 100 bases:

>100_bases
GGCGCTCCTCTTCGCGGTCCTCCAAGTAAATGTTCCACACCACCCTCATCCCTCCGCACTTAGGGCAAGGCCCCTCAACC
ATGCCTACGAAGTCCCCCTC

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MRGHKDLDELDYKILSLLMENARKGVREIARELNVSPATVHNRLKKMLSKGIIKGFVPLMDFSVLGYQVTAIIMLSVEGS
KLKELEEELKNIKNVIAIYDITGDYDVLLIAKFKDVKALDFFVKDLLERKEIKKSVTHIAFNVVKEDFRVPL

Sequences:

>Translated_152_residues
MRGHKDLDELDYKILSLLMENARKGVREIARELNVSPATVHNRLKKMLSKGIIKGFVPLMDFSVLGYQVTAIIMLSVEGS
KLKELEEELKNIKNVIAIYDITGDYDVLLIAKFKDVKALDFFVKDLLERKEIKKSVTHIAFNVVKEDFRVPL
>Mature_152_residues
MRGHKDLDELDYKILSLLMENARKGVREIARELNVSPATVHNRLKKMLSKGIIKGFVPLMDFSVLGYQVTAIIMLSVEGS
KLKELEEELKNIKNVIAIYDITGDYDVLLIAKFKDVKALDFFVKDLLERKEIKKSVTHIAFNVVKEDFRVPL

Specific function: Activator Of Asna Transcription; Autogenous Regulator Of Its Own Transcription; And Repressor Of The Expression Of Gida At A Post-Transcriptional Level. [C]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790182, Length=114, Percent_Identity=33.3333333333333, Blast_Score=61, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR013196
- InterPro:   IPR000485
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg; PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 17420; Mature: 17420

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGHKDLDELDYKILSLLMENARKGVREIARELNVSPATVHNRLKKMLSKGIIKGFVPLM
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
DFSVLGYQVTAIIMLSVEGSKLKELEEELKNIKNVIAIYDITGDYDVLLIAKFKDVKALD
HHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEECCCCHHHHH
FFVKDLLERKEIKKSVTHIAFNVVKEDFRVPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRGHKDLDELDYKILSLLMENARKGVREIARELNVSPATVHNRLKKMLSKGIIKGFVPLM
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
DFSVLGYQVTAIIMLSVEGSKLKELEEELKNIKNVIAIYDITGDYDVLLIAKFKDVKALD
HHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEECCCCHHHHH
FFVKDLLERKEIKKSVTHIAFNVVKEDFRVPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA