| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is 156937126
Identifier: 156937126
GI number: 156937126
Start: 292640
End: 293686
Strand: Reverse
Name: 156937126
Synonym: Igni_0332
Alternate gene names: NA
Gene position: 293686-292640 (Counterclockwise)
Preceding gene: 156937127
Following gene: 156937125
Centisome position: 22.63
GC content: 58.93
Gene sequence:
>1047_bases ATGCTCTGGCTCGTTTACAGCTCCTCTAAGTGTAACCTCAAGTGCAAGTACTGCGGGGGCTCTTGGCCGGACCTCCCCCC TAAGCCGGTCTACCCCGTCTCAACCTTGAAGGAGTACTTGGAGGCCGTGGACCCTAGGCCGGCGATAGTGTTCTACGGAG GGGAGCCCTTGCTGAACCCGAAGTTCATAATGGACGTAATGGACAACGTCGAGGCTACCTTCGGCATACAGACCAACGCC ACCTTACACCACCTCTTGCCCCCGAGGTACTGGGAGAGGATGAAGAACGTCTTGATCTCTATAGACGGCCCGGAGGAGTT CAACGACTCCCGCAGGGGGAGGGGGAGCTACGCGAAGGCCTTGGAGCTGGCCTACAAGGCTAGGAGGCTGGGGGTGAAGA GGGTCATAGCCAGGATGGCCGTTGACTTGGAGAGCGACATATATAGAGACGTAAAGCACTTGCTCTCCCTCCCCTTCACC CACGTCCACTGGCAGCTGTCGGTGGACTGGGTGCCCAAGTGGGACTTGAGGGGATGGGCGGAGAGGAGCTACTTGCCGGG CATAAGGAGGTTGGCAGAGGAGTTCAAAGAACACTACTTGAGGACTGGGGAGCTCTTGGGGATAGTCCCCTTCATAGCCC TCTTAAAGGCTCACAAGGAGCCTTGGGACTGGGTGCCGTGCGGGGCCGGGAGGAAGGCCTACTCCGTGCTCACGGACGGC AGCGTGGTGGCTTGTCCCATAGCGCCCTATGAGGGTTGGGCCAAGGCCGGGAGCGTTTACGAGCGCTCCCCTCCCAAGGC CTTGAGTTACCCCGAGGGGGTCCCTTGCGAGAGGTGCGAGTACAAGGGCTACTGCGGCGGGAGGTGCTTGTACTGGCTTT ACGAGAGGTTTTGGGGAGATGAAGGTATGAAGGAGATATGCTGGGTAACGAAGAAGTATATAGATACCTTCTTTGAGGTT GTGGGAGACTTGGCGGACGAGATGGCGGAGCACGAGGAAGTGGCCTCCTACGACCCCTTGGAGGACTCCACCGAAGCGGT GCCGTAA
Upstream 100 bases:
>100_bases AGGACTCGGAAGTGACGGTCTCTATAGTAATGAGGAGGCTCGCCCCGGAGGAGGCGGAAGAGGTGAAAAACGTCTTGGAG AGCGCGTGTAAGAGGCGGTA
Downstream 100 bases:
>100_bases AAAAGGGCTCAGTCGAAGGGGCGGCGGGCTGAAGCTGACAAAGTTCGTTTTCATAACCGGCGGGGTGCTCTCCAGCCTAG GGAAGGGTATCCTAACGGCA
Product: radical SAM domain-containing protein
Products: NA
Alternate protein names: Radical SAM Domain Protein; Radical SAM Family Protein; Fe-S Oxidoreductase
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MLWLVYSSSKCNLKCKYCGGSWPDLPPKPVYPVSTLKEYLEAVDPRPAIVFYGGEPLLNPKFIMDVMDNVEATFGIQTNA TLHHLLPPRYWERMKNVLISIDGPEEFNDSRRGRGSYAKALELAYKARRLGVKRVIARMAVDLESDIYRDVKHLLSLPFT HVHWQLSVDWVPKWDLRGWAERSYLPGIRRLAEEFKEHYLRTGELLGIVPFIALLKAHKEPWDWVPCGAGRKAYSVLTDG SVVACPIAPYEGWAKAGSVYERSPPKALSYPEGVPCERCEYKGYCGGRCLYWLYERFWGDEGMKEICWVTKKYIDTFFEV VGDLADEMAEHEEVASYDPLEDSTEAVP
Sequences:
>Translated_348_residues MLWLVYSSSKCNLKCKYCGGSWPDLPPKPVYPVSTLKEYLEAVDPRPAIVFYGGEPLLNPKFIMDVMDNVEATFGIQTNA TLHHLLPPRYWERMKNVLISIDGPEEFNDSRRGRGSYAKALELAYKARRLGVKRVIARMAVDLESDIYRDVKHLLSLPFT HVHWQLSVDWVPKWDLRGWAERSYLPGIRRLAEEFKEHYLRTGELLGIVPFIALLKAHKEPWDWVPCGAGRKAYSVLTDG SVVACPIAPYEGWAKAGSVYERSPPKALSYPEGVPCERCEYKGYCGGRCLYWLYERFWGDEGMKEICWVTKKYIDTFFEV VGDLADEMAEHEEVASYDPLEDSTEAVP >Mature_348_residues MLWLVYSSSKCNLKCKYCGGSWPDLPPKPVYPVSTLKEYLEAVDPRPAIVFYGGEPLLNPKFIMDVMDNVEATFGIQTNA TLHHLLPPRYWERMKNVLISIDGPEEFNDSRRGRGSYAKALELAYKARRLGVKRVIARMAVDLESDIYRDVKHLLSLPFT HVHWQLSVDWVPKWDLRGWAERSYLPGIRRLAEEFKEHYLRTGELLGIVPFIALLKAHKEPWDWVPCGAGRKAYSVLTDG SVVACPIAPYEGWAKAGSVYERSPPKALSYPEGVPCERCEYKGYCGGRCLYWLYERFWGDEGMKEICWVTKKYIDTFFEV VGDLADEMAEHEEVASYDPLEDSTEAVP
Specific function: Unknown
COG id: COG0535
COG function: function code R; Predicted Fe-S oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39874; Mature: 39874
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLWLVYSSSKCNLKCKYCGGSWPDLPPKPVYPVSTLKEYLEAVDPRPAIVFYGGEPLLNP CEEEEEECCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCH KFIMDVMDNVEATFGIQTNATLHHLLPPRYWERMKNVLISIDGPEEFNDSRRGRGSYAKA HHHHHHHHCCHHEECCCCCCHHHHCCCHHHHHHHHHEEEECCCCHHHCCCCCCCCHHHHH LELAYKARRLGVKRVIARMAVDLESDIYRDVKHLLSLPFTHVHWQLSVDWVPKWDLRGWA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCHH ERSYLPGIRRLAEEFKEHYLRTGELLGIVPFIALLKAHKEPWDWVPCGAGRKAYSVLTDG HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECC SVVACPIAPYEGWAKAGSVYERSPPKALSYPEGVPCERCEYKGYCGGRCLYWLYERFWGD CEEEEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHCC EGMKEICWVTKKYIDTFFEVVGDLADEMAEHEEVASYDPLEDSTEAVP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MLWLVYSSSKCNLKCKYCGGSWPDLPPKPVYPVSTLKEYLEAVDPRPAIVFYGGEPLLNP CEEEEEECCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCH KFIMDVMDNVEATFGIQTNATLHHLLPPRYWERMKNVLISIDGPEEFNDSRRGRGSYAKA HHHHHHHHCCHHEECCCCCCHHHHCCCHHHHHHHHHEEEECCCCHHHCCCCCCCCHHHHH LELAYKARRLGVKRVIARMAVDLESDIYRDVKHLLSLPFTHVHWQLSVDWVPKWDLRGWA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCHH ERSYLPGIRRLAEEFKEHYLRTGELLGIVPFIALLKAHKEPWDWVPCGAGRKAYSVLTDG HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECC SVVACPIAPYEGWAKAGSVYERSPPKALSYPEGVPCERCEYKGYCGGRCLYWLYERFWGD CEEEEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHCC EGMKEICWVTKKYIDTFFEVVGDLADEMAEHEEVASYDPLEDSTEAVP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA