| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is thrS [H]
Identifier: 156937107
GI number: 156937107
Start: 266591
End: 268249
Strand: Reverse
Name: thrS [H]
Synonym: Igni_0313
Alternate gene names: 156937107
Gene position: 268249-266591 (Counterclockwise)
Preceding gene: 156937108
Following gene: 156937106
Centisome position: 20.67
GC content: 56.9
Gene sequence:
>1659_bases ATGAAAGTGTTGATAGTGCGCAGCAAGAGCTTCGCGGCCGGGAACGAGAGGCTGGACGACGCTTTGGTCGCCTTCGTCGC CGTGGAGCCCGGGGACGAGACCGTATTAGACGAAGTCGCGGAGGACTTGATAAACTTCATGAAGTACTCTGACGCCAAAG TTTTGGTAATTTACCCCCACTCCAAGCTATCTCCAATGCCGGAGAACTACCACGAAGCTATGAAGAAGATACGGGAGTTG GTAGATCTCTTGCAGAGGAAGGGAGTGCCGGTAAAGGAGGTGGAGGCCGGCGCTAAGGGGTTCGTACTAGAGACCTTGGG CGTCCCGGCCCTTCACGAGTTCCGCTCCTACGGCCCCCGGAAGAGGCTTCAGACGGTCGCGGAGTACGTGGTGAACCCAG AAGGGGAGTTCAAGGGGATTGAGGAGTGCGAGGACGCCTCGTTGGTCAGCTTGATAAAGTTCATGAAGGGGGGCCAAAAG GTAGAGCACGACCCCAACGTGGAGAGGTTCTGTCGCAAGTTCGGCTTCGCGGAGGCCGAGGTGACCCCAAGAGGCTTTTG GACCCTCCTGCCCCACGCCTACTTCATGTACTTGGCCTTCACAGTCCACGTTACCTCCGTGCTCCAAGCTTTGGAGGTGC CCACGATCTCCGTCAAGACGCCGGAGGTGGTTAGGTACGGCTGTGACATCTCTTGTTCAGACGGCTTCTTGAGGTGCGAC GAGTTCAAAGAACACAAACAAGTTGTGGAGAAGTACGCGGACCCCAACGACTTACCCTTCGCCCTCTTTGAGCAGCTCTT GTTGTTTAGGGAAGAGGAAGACACCTTCCCGTGCTACAGAACGAAAGAGTTCCACGTCCCTAAGGTAAGAATATTCGTTC CCTCCTTCTCCGAGGCCTCCGACGTTGCGCTCACCCTGCACGAGCTCATCCACACGGAGGCGGAGAAGCTCGGGATGAAG TACGTAGTCTCCTACACAGTTTCTGAGGAGCTCTTCGAAGAGGCCAAGGACTTGATCATAAAGCTGGTTAAGAGGGACAA CCGCTGCGCGTACCTAAGGGTGGTCAAATCCAATGAGATCTTCATCGACGCCGAAATGTACGTGATAAACTCCATGGGGT ACCCCGTGGAGCTGGGGACGTGGAAGATGAGGAAGGCGCTCATGTGGGGCAGGGAGGTCTACTCCGTCTCTGCCGCCCCC CTAGGCTCCTTCGAGCGCTTCGCTTACGTGATATTCGACAAGGCCGCCAAGGACTTGAAGTCCGGCGAGACGCCGGAGCT TCCGGCCTGGCTCTCCCCCATACAAGTTAGGGTCATACCTAAGAGCAGGGACGTACTGCCCTACGCGCTCACCGTTGCGG AGGAGCTGAGGGAGAGGGGGATAAGGGTGGATGTAGACGACAGGAACGTGCCCCTCTCCAGAAAGCTGAAGGACGCGGGA GAGGAGTGGGTGCCGTTCCTACTCTTAATAGACAAGAGGGAAGAGAAGCTCGGGAGGGTCATACTGATGAGGAGGAAGAC CAACGATCGGGAGGACGTGAGCTTAGAGGAAGTAATAAGGGTGGTCTCCGAGGAAGTTGGGGGCTACCCCCAGCTCCCCC AGACGCTCCCGATACTGTACTCCAAGAGGCCCAAGTTCGCCAAGCCCGATGAGGACTAG
Upstream 100 bases:
>100_bases GATAGGTTCCCTCATAGGGGCTGTAGCCTACAAGGTCCCCCGCGCGGTTTCTCCAAAACTATAATTCGTCCTACGCTTAG GCTATAACGGAGACTAAGTA
Downstream 100 bases:
>100_bases GGCAGTATCTGAGGAGGTGAAGTAGGTCTTGAGCGCTGAGGGAATCTCCTTCAAACCCACCTTGAGGGCCAGAGCGGGGG AGCTGTTCTTCCTAGCGCTG
Product: anticodon-binding domain-containing protein
Products: NA
Alternate protein names: Threonine--tRNA ligase; ThrRS [H]
Number of amino acids: Translated: 552; Mature: 552
Protein sequence:
>552_residues MKVLIVRSKSFAAGNERLDDALVAFVAVEPGDETVLDEVAEDLINFMKYSDAKVLVIYPHSKLSPMPENYHEAMKKIREL VDLLQRKGVPVKEVEAGAKGFVLETLGVPALHEFRSYGPRKRLQTVAEYVVNPEGEFKGIEECEDASLVSLIKFMKGGQK VEHDPNVERFCRKFGFAEAEVTPRGFWTLLPHAYFMYLAFTVHVTSVLQALEVPTISVKTPEVVRYGCDISCSDGFLRCD EFKEHKQVVEKYADPNDLPFALFEQLLLFREEEDTFPCYRTKEFHVPKVRIFVPSFSEASDVALTLHELIHTEAEKLGMK YVVSYTVSEELFEEAKDLIIKLVKRDNRCAYLRVVKSNEIFIDAEMYVINSMGYPVELGTWKMRKALMWGREVYSVSAAP LGSFERFAYVIFDKAAKDLKSGETPELPAWLSPIQVRVIPKSRDVLPYALTVAEELRERGIRVDVDDRNVPLSRKLKDAG EEWVPFLLLIDKREEKLGRVILMRRKTNDREDVSLEEVIRVVSEEVGGYPQLPQTLPILYSKRPKFAKPDED
Sequences:
>Translated_552_residues MKVLIVRSKSFAAGNERLDDALVAFVAVEPGDETVLDEVAEDLINFMKYSDAKVLVIYPHSKLSPMPENYHEAMKKIREL VDLLQRKGVPVKEVEAGAKGFVLETLGVPALHEFRSYGPRKRLQTVAEYVVNPEGEFKGIEECEDASLVSLIKFMKGGQK VEHDPNVERFCRKFGFAEAEVTPRGFWTLLPHAYFMYLAFTVHVTSVLQALEVPTISVKTPEVVRYGCDISCSDGFLRCD EFKEHKQVVEKYADPNDLPFALFEQLLLFREEEDTFPCYRTKEFHVPKVRIFVPSFSEASDVALTLHELIHTEAEKLGMK YVVSYTVSEELFEEAKDLIIKLVKRDNRCAYLRVVKSNEIFIDAEMYVINSMGYPVELGTWKMRKALMWGREVYSVSAAP LGSFERFAYVIFDKAAKDLKSGETPELPAWLSPIQVRVIPKSRDVLPYALTVAEELRERGIRVDVDDRNVPLSRKLKDAG EEWVPFLLLIDKREEKLGRVILMRRKTNDREDVSLEEVIRVVSEEVGGYPQLPQTLPILYSKRPKFAKPDED >Mature_552_residues MKVLIVRSKSFAAGNERLDDALVAFVAVEPGDETVLDEVAEDLINFMKYSDAKVLVIYPHSKLSPMPENYHEAMKKIREL VDLLQRKGVPVKEVEAGAKGFVLETLGVPALHEFRSYGPRKRLQTVAEYVVNPEGEFKGIEECEDASLVSLIKFMKGGQK VEHDPNVERFCRKFGFAEAEVTPRGFWTLLPHAYFMYLAFTVHVTSVLQALEVPTISVKTPEVVRYGCDISCSDGFLRCD EFKEHKQVVEKYADPNDLPFALFEQLLLFREEEDTFPCYRTKEFHVPKVRIFVPSFSEASDVALTLHELIHTEAEKLGMK YVVSYTVSEELFEEAKDLIIKLVKRDNRCAYLRVVKSNEIFIDAEMYVINSMGYPVELGTWKMRKALMWGREVYSVSAAP LGSFERFAYVIFDKAAKDLKSGETPELPAWLSPIQVRVIPKSRDVLPYALTVAEELRERGIRVDVDDRNVPLSRKLKDAG EEWVPFLLLIDKREEKLGRVILMRRKTNDREDVSLEEVIRVVSEEVGGYPQLPQTLPILYSKRPKFAKPDED
Specific function: Thrs Is Also A Translational Repressor Protein, It Controls The Translation Of Its Own Gene By Binding To Its mRNA. [C]
COG id: COG0441
COG function: function code J; Threonyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]
Homologues:
None
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002314 - InterPro: IPR006195 - InterPro: IPR004154 - InterPro: IPR002320 - InterPro: IPR015011 - ProDom: PD016189 [H]
Pfam domain/function: PF03129 HGTP_anticodon; PF00587 tRNA-synt_2b; PF08915 tRNA-Thr_ED [H]
EC number: =6.1.1.3 [H]
Molecular weight: Translated: 63164; Mature: 63164
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLIVRSKSFAAGNERLDDALVAFVAVEPGDETVLDEVAEDLINFMKYSDAKVLVIYPH CEEEEEECCCCCCCCHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECC SKLSPMPENYHEAMKKIRELVDLLQRKGVPVKEVEAGAKGFVLETLGVPALHEFRSYGPR CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEHHCCCCHHHHHHCCCHH KRLQTVAEYVVNPEGEFKGIEECEDASLVSLIKFMKGGQKVEHDPNVERFCRKFGFAEAE HHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCC VTPRGFWTLLPHAYFMYLAFTVHVTSVLQALEVPTISVKTPEVVRYGCDISCSDGFLRCD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHCCCCEECCCCCEEHH EFKEHKQVVEKYADPNDLPFALFEQLLLFREEEDTFPCYRTKEFHVPKVRIFVPSFSEAS HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCH DVALTLHELIHTEAEKLGMKYVVSYTVSEELFEEAKDLIIKLVKRDNRCAYLRVVKSNEI HHHHHHHHHHHHHHHHCCHHHEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCEE FIDAEMYVINSMGYPVELGTWKMRKALMWGREVYSVSAAPLGSFERFAYVIFDKAAKDLK EEEEEEEEEECCCCCEEECHHHHHHHHHHCHHHHEECCCCCCCHHHHHHHHHHHHHHHHH SGETPELPAWLSPIQVRVIPKSRDVLPYALTVAEELRERGIRVDVDDRNVPLSRKLKDAG CCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHCC EEWVPFLLLIDKREEKLGRVILMRRKTNDREDVSLEEVIRVVSEEVGGYPQLPQTLPILY HHHCEEEEEEECCHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHH SKRPKFAKPDED CCCCCCCCCCCC >Mature Secondary Structure MKVLIVRSKSFAAGNERLDDALVAFVAVEPGDETVLDEVAEDLINFMKYSDAKVLVIYPH CEEEEEECCCCCCCCHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECC SKLSPMPENYHEAMKKIRELVDLLQRKGVPVKEVEAGAKGFVLETLGVPALHEFRSYGPR CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEHHCCCCHHHHHHCCCHH KRLQTVAEYVVNPEGEFKGIEECEDASLVSLIKFMKGGQKVEHDPNVERFCRKFGFAEAE HHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCC VTPRGFWTLLPHAYFMYLAFTVHVTSVLQALEVPTISVKTPEVVRYGCDISCSDGFLRCD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHCCCCEECCCCCEEHH EFKEHKQVVEKYADPNDLPFALFEQLLLFREEEDTFPCYRTKEFHVPKVRIFVPSFSEAS HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCH DVALTLHELIHTEAEKLGMKYVVSYTVSEELFEEAKDLIIKLVKRDNRCAYLRVVKSNEI HHHHHHHHHHHHHHHHCCHHHEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCEE FIDAEMYVINSMGYPVELGTWKMRKALMWGREVYSVSAAPLGSFERFAYVIFDKAAKDLK EEEEEEEEEECCCCCEEECHHHHHHHHHHCHHHHEECCCCCCCHHHHHHHHHHHHHHHHH SGETPELPAWLSPIQVRVIPKSRDVLPYALTVAEELRERGIRVDVDDRNVPLSRKLKDAG CCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHCC EEWVPFLLLIDKREEKLGRVILMRRKTNDREDVSLEEVIRVVSEEVGGYPQLPQTLPILY HHHCEEEEEEECCHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHH SKRPKFAKPDED CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA