Click here to switch to the map view.

The map label for this gene is 156937094

Identifier: 156937094

GI number: 156937094

Start: 255913

End: 257043

Strand: Reverse

Name: 156937094

Synonym: Igni_0300

Alternate gene names: NA

Gene position: 257043-255913 (Counterclockwise)

Preceding gene: 156937095

Following gene: 156937090

Centisome position: 19.81

GC content: 58.53

Gene sequence:

>1131_bases
TTGGGGAGGCTCACGAAGGCTATAGAGATGAAGAGGAAGAAGTTGGAAGAGTTAAAGGAGATTGTAGAGGACGTGAGGAA
GGCCGAAGAGGACTGGCACGCGAGGAGGGAGCCGAGGGACTGCGGGATAACGGTCCACCCGGGGATAGGGTGCGACTTGG
GCTGCGTTTATTGTTACATAGCTGACATGGGGTTCCCCACGGACAAGGTGGAGCCCTACCCCCTCAGCGGGCCGGAGCTG
GCGCTGGCGTTAATGCTCAACCCCAACGTCGCCCCCGGCCCCACCGGGACCTACGTGGCGGTGGGCTCCGTTACGGAGCC
CTTCCACCCCTTACTGTTGGACAAGACCTTCGAATACCTCAAGTGGTTGAAGTACTTGGGCAACTACACGCAAATGTCGT
TTAAGATGGTGTTCCCCGAGAGGAGGTTGAATGAGTTCTTGGAGTCCTCCGAGAGGAGGCTGAGCGTGTTAGTTTCGGTA
AGCAGCTTGAGGAGGGCAAGGGAGCTGGAGCCGAGGCTCCCCCCGGTGGAGAAGAGGTTCGAGCTGGCTAAGAAGATAAA
GGACGGAGGGAAGGGGGTCGCCGTCTTCATAAGGCCGATAATCCCCGGCATAACTGACAAGGAGTCCAAGGAGTTGTTGG
AACTGGCCTCCAGCTACGGCTTGGAGGACGTGGTCCTAGGGGGGCTGAGGGTGACTCAGAGGATAATGAAGAACTTGCGC
TCCTTGGGGGTCTCTCTGGAGGGGAGGCTGAGGAGGCTCCCGAGGGGGAGGGAACAAGTCTACGTGTACACTAGGGATTT
GAGGGACAAGATAGCTAGGGAGGCCGAGTCCTTGGGCATGAGGGTACTCTACACCGCTTGCGACGCCAACGCGAGGCACC
ACGGAGAGGTGTGCTGGGACTCTTGCATCTTCGAGAGGGAGCTCTGCGAGCGCTTGCCTCCCGTGGACCCGAGGGACTTG
AGGGAGGGGGTGGAGATGTTGGGGGGCAAGCTGGTGAGCTTCGAGCTCAAGGAGCCCGTCCTGAAGGTCGAGGCTGAGGG
GTTGAAGAAGAACGCGGGGTGGATAATACAAATGGCCTACAGGAGGCAAGTTATATTGAAGGTCGGCGGGAGGACCTTCT
ATTACAAGTAG

Upstream 100 bases:

>100_bases
TCCGGAACCCGAAGCTCAAGGAGCAGTTCGTAAGCGACTTAAAGAAGGCCTTTAACGAGGTCTACAAGCAGAGGTCCCTG
TTCGACTCCGGGTGAGGGCC

Downstream 100 bases:

>100_bases
GCGTAGGCCCCCTCCTCGCCGGAGCTCACGAAGAGCGCCCTGACCTTGTAAGAGTCCCCATCCTTCTCCACGTCGAAGCT
CGTAGGCATGTAAAAGCTGA

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: DNA Photolyase; Radical SAM Domain Protein

Number of amino acids: Translated: 376; Mature: 375

Protein sequence:

>376_residues
MGRLTKAIEMKRKKLEELKEIVEDVRKAEEDWHARREPRDCGITVHPGIGCDLGCVYCYIADMGFPTDKVEPYPLSGPEL
ALALMLNPNVAPGPTGTYVAVGSVTEPFHPLLLDKTFEYLKWLKYLGNYTQMSFKMVFPERRLNEFLESSERRLSVLVSV
SSLRRARELEPRLPPVEKRFELAKKIKDGGKGVAVFIRPIIPGITDKESKELLELASSYGLEDVVLGGLRVTQRIMKNLR
SLGVSLEGRLRRLPRGREQVYVYTRDLRDKIAREAESLGMRVLYTACDANARHHGEVCWDSCIFERELCERLPPVDPRDL
REGVEMLGGKLVSFELKEPVLKVEAEGLKKNAGWIIQMAYRRQVILKVGGRTFYYK

Sequences:

>Translated_376_residues
MGRLTKAIEMKRKKLEELKEIVEDVRKAEEDWHARREPRDCGITVHPGIGCDLGCVYCYIADMGFPTDKVEPYPLSGPEL
ALALMLNPNVAPGPTGTYVAVGSVTEPFHPLLLDKTFEYLKWLKYLGNYTQMSFKMVFPERRLNEFLESSERRLSVLVSV
SSLRRARELEPRLPPVEKRFELAKKIKDGGKGVAVFIRPIIPGITDKESKELLELASSYGLEDVVLGGLRVTQRIMKNLR
SLGVSLEGRLRRLPRGREQVYVYTRDLRDKIAREAESLGMRVLYTACDANARHHGEVCWDSCIFERELCERLPPVDPRDL
REGVEMLGGKLVSFELKEPVLKVEAEGLKKNAGWIIQMAYRRQVILKVGGRTFYYK
>Mature_375_residues
GRLTKAIEMKRKKLEELKEIVEDVRKAEEDWHARREPRDCGITVHPGIGCDLGCVYCYIADMGFPTDKVEPYPLSGPELA
LALMLNPNVAPGPTGTYVAVGSVTEPFHPLLLDKTFEYLKWLKYLGNYTQMSFKMVFPERRLNEFLESSERRLSVLVSVS
SLRRARELEPRLPPVEKRFELAKKIKDGGKGVAVFIRPIIPGITDKESKELLELASSYGLEDVVLGGLRVTQRIMKNLRS
LGVSLEGRLRRLPRGREQVYVYTRDLRDKIAREAESLGMRVLYTACDANARHHGEVCWDSCIFERELCERLPPVDPRDLR
EGVEMLGGKLVSFELKEPVLKVEAEGLKKNAGWIIQMAYRRQVILKVGGRTFYYK

Specific function: Unknown

COG id: COG1533

COG function: function code L; DNA repair photolyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42914; Mature: 42782

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRLTKAIEMKRKKLEELKEIVEDVRKAEEDWHARREPRDCGITVHPGIGCDLGCVYCYI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHH
ADMGFPTDKVEPYPLSGPELALALMLNPNVAPGPTGTYVAVGSVTEPFHPLLLDKTFEYL
HHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHH
KWLKYLGNYTQMSFKMVFPERRLNEFLESSERRLSVLVSVSSLRRARELEPRLPPVEKRF
HHHHHHCCHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
ELAKKIKDGGKGVAVFIRPIIPGITDKESKELLELASSYGLEDVVLGGLRVTQRIMKNLR
HHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
SLGVSLEGRLRRLPRGREQVYVYTRDLRDKIAREAESLGMRVLYTACDANARHHGEVCWD
HCCCCHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHH
SCIFERELCERLPPVDPRDLREGVEMLGGKLVSFELKEPVLKVEAEGLKKNAGWIIQMAY
HHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEEEHHCCHHHHHHHCCCCCCCCEEEEHH
RRQVILKVGGRTFYYK
HHHHHEEECCEEECCC
>Mature Secondary Structure 
GRLTKAIEMKRKKLEELKEIVEDVRKAEEDWHARREPRDCGITVHPGIGCDLGCVYCYI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHH
ADMGFPTDKVEPYPLSGPELALALMLNPNVAPGPTGTYVAVGSVTEPFHPLLLDKTFEYL
HHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHH
KWLKYLGNYTQMSFKMVFPERRLNEFLESSERRLSVLVSVSSLRRARELEPRLPPVEKRF
HHHHHHCCHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
ELAKKIKDGGKGVAVFIRPIIPGITDKESKELLELASSYGLEDVVLGGLRVTQRIMKNLR
HHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
SLGVSLEGRLRRLPRGREQVYVYTRDLRDKIAREAESLGMRVLYTACDANARHHGEVCWD
HCCCCHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHH
SCIFERELCERLPPVDPRDLREGVEMLGGKLVSFELKEPVLKVEAEGLKKNAGWIIQMAY
HHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEEEHHCCHHHHHHHCCCCCCCCEEEEHH
RRQVILKVGGRTFYYK
HHHHHEEECCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA