| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is 156937053
Identifier: 156937053
GI number: 156937053
Start: 223186
End: 223602
Strand: Reverse
Name: 156937053
Synonym: Igni_0258
Alternate gene names: NA
Gene position: 223602-223186 (Counterclockwise)
Preceding gene: 156937054
Following gene: 156937049
Centisome position: 17.23
GC content: 59.71
Gene sequence:
>417_bases GTGATAAGCGCGAGGTCGGCCCAGAAGGCAGCCCTCAAGGGCTTGGAGAACGCCTTGGGAGGGTTCATAGGCGAGCCTCA AGTGGAGGTGCAAGAGGGCGAGGGTTCCCTCTCAATGAAGATAGTCTTCGAGGTAGTCAAGGAGGGCCAGATAAGCGCCG GCGGCGAGACTAGGAAGGTAAAGCCCGGGAAGTACGAGATGAACGTGGAAGTCACCTTTGGGAAGAGGGGTAACATGTTA GAGGCCCACTTCTCCGGCAAGTGCGGCGAGAGCGCCTTGAGCGACATGTACGTCGTGGAGGAGAACAAGCTGGACTACGT TAGGAACTGGCTCAGCGACAAGGTAGGGGCCCTAGCGGTCCAGTGCGCGACCGAGGCCGAGGAGACCGCGGACATAGGCG GGGTCTTGGGTTGGTAA
Upstream 100 bases:
>100_bases GGCCGATGAGGATCGCGTACTTGGCCGACTGGGTGAGGAGCGGGTCACGGGACGGAGGCCTATTACACCCCCAGAGGGCC TTCTCTCTTGGGAAGGAGCC
Downstream 100 bases:
>100_bases GTTTTTATTTAAAGTGAAAGAAAGGGTTCCTCGAGGTCACATTCCTAAGTCTCTCCTCAACTCCTCTACCGCCCTCTTCA CTTCCTCCACGGACGCCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MISARSAQKAALKGLENALGGFIGEPQVEVQEGEGSLSMKIVFEVVKEGQISAGGETRKVKPGKYEMNVEVTFGKRGNML EAHFSGKCGESALSDMYVVEENKLDYVRNWLSDKVGALAVQCATEAEETADIGGVLGW
Sequences:
>Translated_138_residues MISARSAQKAALKGLENALGGFIGEPQVEVQEGEGSLSMKIVFEVVKEGQISAGGETRKVKPGKYEMNVEVTFGKRGNML EAHFSGKCGESALSDMYVVEENKLDYVRNWLSDKVGALAVQCATEAEETADIGGVLGW >Mature_138_residues MISARSAQKAALKGLENALGGFIGEPQVEVQEGEGSLSMKIVFEVVKEGQISAGGETRKVKPGKYEMNVEVTFGKRGNML EAHFSGKCGESALSDMYVVEENKLDYVRNWLSDKVGALAVQCATEAEETADIGGVLGW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14788; Mature: 14788
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISARSAQKAALKGLENALGGFIGEPQVEVQEGEGSLSMKIVFEVVKEGQISAGGETRKV CCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCC KPGKYEMNVEVTFGKRGNMLEAHFSGKCGESALSDMYVVEENKLDYVRNWLSDKVGALAV CCCCEEEEEEEEECCCCCEEEECCCCCCCCHHHHCEEEEECCCHHHHHHHHHHHHHHEEE QCATEAEETADIGGVLGW HHHHCCHHHHHCCCCCCC >Mature Secondary Structure MISARSAQKAALKGLENALGGFIGEPQVEVQEGEGSLSMKIVFEVVKEGQISAGGETRKV CCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCC KPGKYEMNVEVTFGKRGNMLEAHFSGKCGESALSDMYVVEENKLDYVRNWLSDKVGALAV CCCCEEEEEEEEECCCCCEEEECCCCCCCCHHHHCEEEEECCCHHHHHHHHHHHHHHEEE QCATEAEETADIGGVLGW HHHHCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA