Click here to switch to the map view.

The map label for this gene is trkA [H]

Identifier: 156937031

GI number: 156937031

Start: 205907

End: 206569

Strand: Reverse

Name: trkA [H]

Synonym: Igni_0236

Alternate gene names: 156937031

Gene position: 206569-205907 (Counterclockwise)

Preceding gene: 156937032

Following gene: 156937030

Centisome position: 15.92

GC content: 53.85

Gene sequence:

>663_bases
TTGAAAATCTTAGTCGTAGGGATAGGCGAGTTGGGGCGCCGCGTGGCCACCGACTTAAGCTTGAAAGGTTACGACGTAGT
GGCGGTTGACGTTAACAGCGAGAAGTGTCAAGCGCTGGCGAGGGAGGCAGACGTCATGGTGATCAACAGGGACGCCACGG
ACCCGAGCCTCTATGAAGAGCTCGAGCTGGGGAGCTTCGACGTAGTCATAGCCTCCACAGACCGGGATGAAGTAAACTTG
TTCGTAGCTGCAGTAGCAAAGGAATACGGGGTAGGGAACATAGTGGTCGTCACGAGGACGGCCAAAGCCTCAGAGCTTAT
AGAGATGTTAGGTCTGGCGGACGTCACTTTCCCATCGCCGATAGTGTCGGCCAAGCTCGTGCTCAGCTACATCGAGGGTA
AATACGGGATAGTGGAGCTGACTAAGGTCCTCAGCGGCAAGTACGGGATATACTCAATAGAGATCACTTCGGGAGACAGC
AGCGTAGGCATGAAAATAAGCGAAATAAAAGAGATATTGCCAAAGGACGTGATGATATTAGCGGTCTTCAACGGCGAACA
GTTCGTGGAACCCGAGGAGGAATTAACTTTGGAGCCGGGGTACATCCTGATCTTACTCGCCCCGGTCGGGAGGGAGGAGG
AGATCGAGAGCGCGCTGAGGTGA

Upstream 100 bases:

>100_bases
CATAATTTCGATAACTCGGCCGGATAAGGCTATGCTCCCTTACGTGTATACCGCGTGGGCAACTCTGTTAGCCTTAGAAG
TGGCAATGGGGTGATAGGAG

Downstream 100 bases:

>100_bases
GAGACGTGGAGCTGTGGCTGTACGTTACCGTCCCCTACTCGATATTACTCGTGCTTGCTTACTTGTTCTTAAGGATAAAG
ATAATAAAGGACATGGTTAA

Product: TrkA domain-containing protein

Products: NA

Alternate protein names: K(+)-uptake protein trkA homolog [H]

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MKILVVGIGELGRRVATDLSLKGYDVVAVDVNSEKCQALAREADVMVINRDATDPSLYEELELGSFDVVIASTDRDEVNL
FVAAVAKEYGVGNIVVVTRTAKASELIEMLGLADVTFPSPIVSAKLVLSYIEGKYGIVELTKVLSGKYGIYSIEITSGDS
SVGMKISEIKEILPKDVMILAVFNGEQFVEPEEELTLEPGYILILLAPVGREEEIESALR

Sequences:

>Translated_220_residues
MKILVVGIGELGRRVATDLSLKGYDVVAVDVNSEKCQALAREADVMVINRDATDPSLYEELELGSFDVVIASTDRDEVNL
FVAAVAKEYGVGNIVVVTRTAKASELIEMLGLADVTFPSPIVSAKLVLSYIEGKYGIVELTKVLSGKYGIYSIEITSGDS
SVGMKISEIKEILPKDVMILAVFNGEQFVEPEEELTLEPGYILILLAPVGREEEIESALR
>Mature_220_residues
MKILVVGIGELGRRVATDLSLKGYDVVAVDVNSEKCQALAREADVMVINRDATDPSLYEELELGSFDVVIASTDRDEVNL
FVAAVAKEYGVGNIVVVTRTAKASELIEMLGLADVTFPSPIVSAKLVLSYIEGKYGIVELTKVLSGKYGIYSIEITSGDS
SVGMKISEIKEILPKDVMILAVFNGEQFVEPEEELTLEPGYILILLAPVGREEEIESALR

Specific function: Part of a potassium transport system [H]

COG id: COG0569

COG function: function code P; K+ transport systems, NAD-binding component

Gene ontology:

Cell location: Peripherally Bound To The Inner Side Of The Inner Membrane Via The Trkg And Trkh Proteins [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RCK N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1789685, Length=216, Percent_Identity=24.0740740740741, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006036
- InterPro:   IPR016040
- InterPro:   IPR006037
- InterPro:   IPR003148 [H]

Pfam domain/function: PF02080 TrkA_C; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 23845; Mature: 23845

Theoretical pI: Translated: 4.12; Mature: 4.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILVVGIGELGRRVATDLSLKGYDVVAVDVNSEKCQALAREADVMVINRDATDPSLYEE
CEEEEEECCHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHCCCEEEEECCCCCHHHHHH
LELGSFDVVIASTDRDEVNLFVAAVAKEYGVGNIVVVTRTAKASELIEMLGLADVTFPSP
HCCCCEEEEEEECCCCHHHEEEEEEHHHCCCCEEEEEEECCCHHHHHHHHCCCCCCCCCH
IVSAKLVLSYIEGKYGIVELTKVLSGKYGIYSIEITSGDSSVGMKISEIKEILPKDVMIL
HHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCEEHHHHHHHCCCCEEEE
AVFNGEQFVEPEEELTLEPGYILILLAPVGREEEIESALR
EEECCCCCCCCHHHEEECCCEEEEEEECCCCHHHHHHHCC
>Mature Secondary Structure
MKILVVGIGELGRRVATDLSLKGYDVVAVDVNSEKCQALAREADVMVINRDATDPSLYEE
CEEEEEECCHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHCCCEEEEECCCCCHHHHHH
LELGSFDVVIASTDRDEVNLFVAAVAKEYGVGNIVVVTRTAKASELIEMLGLADVTFPSP
HCCCCEEEEEEECCCCHHHEEEEEEHHHCCCCEEEEEEECCCHHHHHHHHCCCCCCCCCH
IVSAKLVLSYIEGKYGIVELTKVLSGKYGIYSIEITSGDSSVGMKISEIKEILPKDVMIL
HHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCEEHHHHHHHCCCCEEEE
AVFNGEQFVEPEEELTLEPGYILILLAPVGREEEIESALR
EEECCCCCCCCHHHEEECCCEEEEEEECCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]