| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is 156936907
Identifier: 156936907
GI number: 156936907
Start: 103723
End: 104604
Strand: Reverse
Name: 156936907
Synonym: Igni_0112
Alternate gene names: NA
Gene position: 104604-103723 (Counterclockwise)
Preceding gene: 156936908
Following gene: 156936906
Centisome position: 8.06
GC content: 53.51
Gene sequence:
>882_bases GTGGCCTTATTCGACTGGGGAACCTACAACGGGTTGACCAAACTGGAGAGCGCGTCCTTGACTGGGATGAGGCTCACCGA AATACCCCCGGCCGAGTTCTCCAGAAGGTACTACACGGAAGAGCACTTTATCAAGTATAGAGAGCTCTCCTCCAAGTACT TCCACTTGGTCACGGCACACGCTCCGTACTACAGCTTGGTAAATCACGACAAGTACACCCACGAGAAGGTGAAGCGGGCT ATGGTGCAAGCGGCCAAGAAGGCCAGCGTCGCCGGGGCCAAGATCTTCAACATGCACCTAGGCCCAAAGGTGAGGGGAGT TCCTTACGACTACGAACCGGTCGTGGACGTAGTCAAAGCTATACTCAACGAAGTCCCCTCGATATACGTTTCCTTGGAGA CCACATACACCGAGAGGTTCCTAGGGAGCTTGGACGAAATAAGAGAGATAATCGAAATGATAGGGGACGAGAGGGTCATA CCCTCCGCCCAGCTGGAGAACGACTTCATGAGGGAAACTAGGGCTTACGCCCACGGGGACTTGACCCTCGCGGACAAGCA AGCCACCGTTGACTTCTGGTTGTCCATATTCAACAAGTTAAAGAGAATGACCAACAAGTACTTCAGCCTCAGGTTTAGTC AGATAATATCCTTCAGGTTTAGAACTTTTATAATGAAGAAGAGGGTACCCCTCGGGAAGGGCTACCCCAGCCTCGAGCCC TTGGCGGAGGCGCTGGCCTTGTTCCTAACCAGAGACCTCTACTACGCCGGCTCGGGCCTGGAGGCGCACTTGATATACAC CGGCCCGTGGCAGCTCAAGTACAGAGATACCGTGAAGCTCTACTGCGAAGTCATGGGGAGGGCCACTTCTTACATCAAGT GA
Upstream 100 bases:
>100_bases AGGACCTCGACGAGTTGGCGGACAAAGTTAAGGAGAAGTTGGAGTTGGTTAGAACGTCATCTGATTAAGCTTTCCCGGGT TCCCTCCTTGGGGAACCTCC
Downstream 100 bases:
>100_bases GGGGAGCGCTATGAAGGTCGTCTGGAGCGAGAGCTTCACGAAACACTTCTTCGCGCCCCCTTCAATAGTTCGCGAGTGGA CTGCCAGGATGAAGAAGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MALFDWGTYNGLTKLESASLTGMRLTEIPPAEFSRRYYTEEHFIKYRELSSKYFHLVTAHAPYYSLVNHDKYTHEKVKRA MVQAAKKASVAGAKIFNMHLGPKVRGVPYDYEPVVDVVKAILNEVPSIYVSLETTYTERFLGSLDEIREIIEMIGDERVI PSAQLENDFMRETRAYAHGDLTLADKQATVDFWLSIFNKLKRMTNKYFSLRFSQIISFRFRTFIMKKRVPLGKGYPSLEP LAEALALFLTRDLYYAGSGLEAHLIYTGPWQLKYRDTVKLYCEVMGRATSYIK
Sequences:
>Translated_293_residues MALFDWGTYNGLTKLESASLTGMRLTEIPPAEFSRRYYTEEHFIKYRELSSKYFHLVTAHAPYYSLVNHDKYTHEKVKRA MVQAAKKASVAGAKIFNMHLGPKVRGVPYDYEPVVDVVKAILNEVPSIYVSLETTYTERFLGSLDEIREIIEMIGDERVI PSAQLENDFMRETRAYAHGDLTLADKQATVDFWLSIFNKLKRMTNKYFSLRFSQIISFRFRTFIMKKRVPLGKGYPSLEP LAEALALFLTRDLYYAGSGLEAHLIYTGPWQLKYRDTVKLYCEVMGRATSYIK >Mature_292_residues ALFDWGTYNGLTKLESASLTGMRLTEIPPAEFSRRYYTEEHFIKYRELSSKYFHLVTAHAPYYSLVNHDKYTHEKVKRAM VQAAKKASVAGAKIFNMHLGPKVRGVPYDYEPVVDVVKAILNEVPSIYVSLETTYTERFLGSLDEIREIIEMIGDERVIP SAQLENDFMRETRAYAHGDLTLADKQATVDFWLSIFNKLKRMTNKYFSLRFSQIISFRFRTFIMKKRVPLGKGYPSLEPL AEALALFLTRDLYYAGSGLEAHLIYTGPWQLKYRDTVKLYCEVMGRATSYIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013022 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33918; Mature: 33786
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALFDWGTYNGLTKLESASLTGMRLTEIPPAEFSRRYYTEEHFIKYRELSSKYFHLVTAH CCEECCCCCCCHHHHCCCCCCCEEECCCCCHHHHHHHCCHHHHHHHHHHCCHHEEEEECC APYYSLVNHDKYTHEKVKRAMVQAAKKASVAGAKIFNMHLGPKVRGVPYDYEPVVDVVKA CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCCCCCCCHHHHHHHHH ILNEVPSIYVSLETTYTERFLGSLDEIREIIEMIGDERVIPSAQLENDFMRETRAYAHGD HHHCCCEEEEEEEHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCC LTLADKQATVDFWLSIFNKLKRMTNKYFSLRFSQIISFRFRTFIMKKRVPLGKGYPSLEP EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH LAEALALFLTRDLYYAGSGLEAHLIYTGPWQLKYRDTVKLYCEVMGRATSYIK HHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ALFDWGTYNGLTKLESASLTGMRLTEIPPAEFSRRYYTEEHFIKYRELSSKYFHLVTAH CEECCCCCCCHHHHCCCCCCCEEECCCCCHHHHHHHCCHHHHHHHHHHCCHHEEEEECC APYYSLVNHDKYTHEKVKRAMVQAAKKASVAGAKIFNMHLGPKVRGVPYDYEPVVDVVKA CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCCCCCCCHHHHHHHHH ILNEVPSIYVSLETTYTERFLGSLDEIREIIEMIGDERVIPSAQLENDFMRETRAYAHGD HHHCCCEEEEEEEHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCC LTLADKQATVDFWLSIFNKLKRMTNKYFSLRFSQIISFRFRTFIMKKRVPLGKGYPSLEP EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH LAEALALFLTRDLYYAGSGLEAHLIYTGPWQLKYRDTVKLYCEVMGRATSYIK HHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]