Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is ygfY [C]
Identifier: 154248181
GI number: 154248181
Start: 4726909
End: 4727205
Strand: Direct
Name: ygfY [C]
Synonym: Xaut_4261
Alternate gene names: 154248181
Gene position: 4726909-4727205 (Clockwise)
Preceding gene: 154248176
Following gene: 154248182
Centisome position: 89.04
GC content: 67.68
Gene sequence:
>297_bases ATGTCCGGCTTAACGAGGTCCAGCGACGGTCTGGACGAGCGCCGCCGCCGCATCCTGTTCCGCGCCTGGCATCGCGGCAT GCGCGAGATGGACCTCATCCTGGGCGGCTTCGCCAATGTGGAGATCGAGACCCTCTCCGACGCCGAGCTGGACGCCTTCG AGGCGCTGCTGGAGCCCGATGACCAGAAGGTCTTCTCCTGGATCAGCGCCAGCGAGCCCACGCCGGCGGAATTCGACACC CCCCTGTTCCGCAAGATCCGCGACTTCCACCTGTCCGGACGCGGCCTGCCGGCCTGA
Upstream 100 bases:
>100_bases AGCGCGCCCCACTGGCCAAACCGCGCCCCATGCCCCTATATGCCGGGCACGGACGGGCCTTCTGGCCCGGCCGACGCCGT GCTTTGGAGGCATCGAGATC
Downstream 100 bases:
>100_bases CCGCGCTGCCGCCTGCTTTTGATCCCGGAGTCCCCCTCGTGAAGCGTCCCCAGCTCCTTGCCGATGCGCTGGCCGAAGGC CGGCCGCTCATCCTCTCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MSGLTRSSDGLDERRRRILFRAWHRGMREMDLILGGFANVEIETLSDAELDAFEALLEPDDQKVFSWISASEPTPAEFDT PLFRKIRDFHLSGRGLPA
Sequences:
>Translated_98_residues MSGLTRSSDGLDERRRRILFRAWHRGMREMDLILGGFANVEIETLSDAELDAFEALLEPDDQKVFSWISASEPTPAEFDT PLFRKIRDFHLSGRGLPA >Mature_97_residues SGLTRSSDGLDERRRRILFRAWHRGMREMDLILGGFANVEIETLSDAELDAFEALLEPDDQKVFSWISASEPTPAEFDTP LFRKIRDFHLSGRGLPA
Specific function: Unknown
COG id: COG2938
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11180; Mature: 11049
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGLTRSSDGLDERRRRILFRAWHRGMREMDLILGGFANVEIETLSDAELDAFEALLEPD CCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCC DQKVFSWISASEPTPAEFDTPLFRKIRDFHLSGRGLPA HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SGLTRSSDGLDERRRRILFRAWHRGMREMDLILGGFANVEIETLSDAELDAFEALLEPD CCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCC DQKVFSWISASEPTPAEFDTPLFRKIRDFHLSGRGLPA HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA