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The map label for this gene is ureD

Identifier: 154248075

GI number: 154248075

Start: 4597232

End: 4598101

Strand: Direct

Name: ureD

Synonym: Xaut_4154

Alternate gene names: 154248075

Gene position: 4597232-4598101 (Clockwise)

Preceding gene: 154248074

Following gene: 154248076

Centisome position: 86.59

GC content: 72.07

Gene sequence:

>870_bases
GTGACGACGTCCGCCGCCTCATGGCGATCTGATCCGGCGGATCCATCCGTCGCATCCGCCCGGGAACGCGCGCTGCGCCA
GCGCAGCGAGGGCCGGGTGCGCATCACGGCGTCGGCTTTCGGGGGCGTGACGCGCCTGACCGACCTCGCCGAGGGCGGCG
CCCTGCGCGCCCGTCTGCCGCGCGGCGGGCCGGGGCTGGAAGCAGTCATCGTCAACACCGCCGGTGGGGTGGCCTGTGGT
GATGTCTTTTCCATCGAGGCCAAGGCGGGGCCGGGCGCCCATCTGACGGTGGCGACTCCTGCCGCCGAGAAGGTCTATCG
CTCGGACGGGCTGTGCGCGGATATCCAGGTGCGGCTTGTCGCGGAGGCCGGCGCGCGGCTCGATTGGCTGCCGCAGGAAA
CCATCCTGTTCGACCGCGCCCGCCTCAGGCGCCGCTACGAGATCGACCTGTCCGCCACCGCCTCCTTCCTTTCCTTCGAG
GCGCTGATGCTGGGTCGCCTTGCCCACGGCGACGCCATGGGGGAGGGGCATCTGGAGGATCACTGGCGCCTCCGCCGCGA
CGGCGCCCTCATTTTCGCCGACGCCTTGCGTCTCGCCGGCCCGATGGGCGCGCTTCTCGCCCGGCCGGCGGTGGCCGGCG
GGAATCGGGCGCTGGCGACGCTGCTTTATGTGGCGCCCGATGCCGAGGCCCGGCTGGAGGAGGCCCGCGCGCTGCTCGAC
GCCGCCCGCTGCGAAGCTGGCGCCAGCGCGTGGAACGGGCTTCTGTGCGTGCGCCTGCTCGCGCCTGACATCGAAACGTT
GCGTCGGGATGCGACCTCGTTTCTCATGGCGTTCAGAAACGCCCCGCTGCCCCGCGTATGGGCCACCTGA

Upstream 100 bases:

>100_bases
GTGGAGCAGTATTTCGAGTTCGCCCGCGACCTTGCCGACAGCTTCATCCTGATGGATCGCGGCGAGGTGGTGGCGAGCGG
GGACAGGAGCGGGCTCGATG

Downstream 100 bases:

>100_bases
CGTTCGCTTCAAGGAGATTGCCGTGCTGCTGACGCCGCGCGAGAAGGACAAGCTCTTCATCGCCATGGCCGCCGAGGTGG
CCCGCAAGCGCCTCGCCCGG

Product: urease accessory protein UreD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MTTSAASWRSDPADPSVASARERALRQRSEGRVRITASAFGGVTRLTDLAEGGALRARLPRGGPGLEAVIVNTAGGVACG
DVFSIEAKAGPGAHLTVATPAAEKVYRSDGLCADIQVRLVAEAGARLDWLPQETILFDRARLRRRYEIDLSATASFLSFE
ALMLGRLAHGDAMGEGHLEDHWRLRRDGALIFADALRLAGPMGALLARPAVAGGNRALATLLYVAPDAEARLEEARALLD
AARCEAGASAWNGLLCVRLLAPDIETLRRDATSFLMAFRNAPLPRVWAT

Sequences:

>Translated_289_residues
MTTSAASWRSDPADPSVASARERALRQRSEGRVRITASAFGGVTRLTDLAEGGALRARLPRGGPGLEAVIVNTAGGVACG
DVFSIEAKAGPGAHLTVATPAAEKVYRSDGLCADIQVRLVAEAGARLDWLPQETILFDRARLRRRYEIDLSATASFLSFE
ALMLGRLAHGDAMGEGHLEDHWRLRRDGALIFADALRLAGPMGALLARPAVAGGNRALATLLYVAPDAEARLEEARALLD
AARCEAGASAWNGLLCVRLLAPDIETLRRDATSFLMAFRNAPLPRVWAT
>Mature_288_residues
TTSAASWRSDPADPSVASARERALRQRSEGRVRITASAFGGVTRLTDLAEGGALRARLPRGGPGLEAVIVNTAGGVACGD
VFSIEAKAGPGAHLTVATPAAEKVYRSDGLCADIQVRLVAEAGARLDWLPQETILFDRARLRRRYEIDLSATASFLSFEA
LMLGRLAHGDAMGEGHLEDHWRLRRDGALIFADALRLAGPMGALLARPAVAGGNRALATLLYVAPDAEARLEEARALLDA
ARCEAGASAWNGLLCVRLLAPDIETLRRDATSFLMAFRNAPLPRVWAT

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter

COG id: COG0829

COG function: function code O; Urease accessory protein UreH

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureD family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): URED_XANP2 (A7IMY3)

Other databases:

- EMBL:   CP000781
- RefSeq:   YP_001419033.1
- STRING:   A7IMY3
- GeneID:   5425448
- GenomeReviews:   CP000781_GR
- KEGG:   xau:Xaut_4154
- eggNOG:   COG0829
- HOGENOM:   HBG711156
- OMA:   QETILFD
- ProtClustDB:   CLSK980186
- BioCyc:   XAUT78245:XAUT_4154-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01384
- InterPro:   IPR002669

Pfam domain/function: PF01774 UreD

EC number: NA

Molecular weight: Translated: 30775; Mature: 30643

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSAASWRSDPADPSVASARERALRQRSEGRVRITASAFGGVTRLTDLAEGGALRARLP
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEHHHCCHHHHHHHHCCCCEEEECC
RGGPGLEAVIVNTAGGVACGDVFSIEAKAGPGAHLTVATPAAEKVYRSDGLCADIQVRLV
CCCCCCEEEEEECCCCEEECCEEEEEECCCCCCEEEEECCHHHHHHHCCCCEEEEEEEEE
AEAGARLDWLPQETILFDRARLRRRYEIDLSATASFLSFEALMLGRLAHGDAMGEGHLED
ECCCCCCCCCCCHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
HWRLRRDGALIFADALRLAGPMGALLARPAVAGGNRALATLLYVAPDAEARLEEARALLD
HHEECCCCCEEEEHHHHHCCHHHHHHHCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHH
AARCEAGASAWNGLLCVRLLAPDIETLRRDATSFLMAFRNAPLPRVWAT
HHHHHCCCHHHHHHHEEEHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TTSAASWRSDPADPSVASARERALRQRSEGRVRITASAFGGVTRLTDLAEGGALRARLP
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEHHHCCHHHHHHHHCCCCEEEECC
RGGPGLEAVIVNTAGGVACGDVFSIEAKAGPGAHLTVATPAAEKVYRSDGLCADIQVRLV
CCCCCCEEEEEECCCCEEECCEEEEEECCCCCCEEEEECCHHHHHHHCCCCEEEEEEEEE
AEAGARLDWLPQETILFDRARLRRRYEIDLSATASFLSFEALMLGRLAHGDAMGEGHLED
ECCCCCCCCCCCHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
HWRLRRDGALIFADALRLAGPMGALLARPAVAGGNRALATLLYVAPDAEARLEEARALLD
HHEECCCCCEEEEHHHHHCCHHHHHHHCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHH
AARCEAGASAWNGLLCVRLLAPDIETLRRDATSFLMAFRNAPLPRVWAT
HHHHHCCCHHHHHHHEEEHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA