Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is braD [H]
Identifier: 154248071
GI number: 154248071
Start: 4592936
End: 4594573
Strand: Direct
Name: braD [H]
Synonym: Xaut_4150
Alternate gene names: 154248071
Gene position: 4592936-4594573 (Clockwise)
Preceding gene: 154248070
Following gene: 154248072
Centisome position: 86.51
GC content: 68.56
Gene sequence:
>1638_bases ATGATGCGCCCTCCCGTTCCGCCGGCCCTCGCGCGGATCCTCGCGCTTCCCCTTCTCGCCCTTCTTCTGGCTGTCCTCCT CCCCGCCTGCGCGGTGCGCGCGCAGGCACAGGCCGATATTTCGGCCATCGTCGCGAAATTCGCGAACGACAGCTATTCGG ATACGACCGACGCGCTGGTTGAGCTTTCGGCCACCGGCAGCGCCCAGGCCGCCGCCGTGGTGGAGGCGCTCGGTGCCGGC CGGCTGATGTTCGATCCGGCCACCAAGGCGGTCTATATCCGCACCCCCGCCGGCATGGCCGATGCTGCCACCGGCACCAT CGTCGCCAATGCGCCGACCAACCTCTCCGTGGTGCGCGCCAACAACCGGGTGCGCCGCGCCATCGATGCGGCTTCCGGCG CGCTCTCGCTGCTCAATCCCGATCCGGTCCGCCGCGCCGAGGCTGCAGCCGCCGTCTTCAAGTCGCGCGATGCCGCTGCG CTGGCGACGGTGGAGGCCGCCATCGCCAAGGAGACGGTGGGAAGCGTGAAGGATGCGCTGGAGCAGGCCCGCGCCGCCAT TCTCGTCGGCAAGTCCGAGGTGCCCGAGGCGGTGCGGCTCCTCGCCATCCAGAAGATCACCGCCCGCGGCGACCAGGAGG CCATCAGCCTGCTGCGCAGCCTGCCGGCGGACGCCCCCGCCAGCCTCAAGGCCGCGGCCGAGGCCGGCATCGCGAAGGTG GAGCAGAATCTCAAGTTCTGGGCCGTGGCGCAGAATGTCTGGTACGGCCTGTCGCTGGGCTCGGTGCTGCTTTTGGCGGC CATCGGGCTGGCCATCACCTTCGGTGTCATGGGCGTCATCAACATGGCCCACGGCGAGATGGTGATGCTGGGTGCCTACA CCACTTTCGTGGTGCAGGACTTCATCCGCCATTCGGCGCCCGGCCTGTTCGACTGGTCGCTGGCCATCGCCCTGCCGCTG GCCTTCCTGTTCACCGGCCTCGTGGGCATCCTCATCGAGCGCACGGTGATCCGCTTCCTCTACGGCCGGCCGCTGGAAAC CCTGCTCGCCACCTGGGGTGTCTCGCTCATCCTCCAGCAGGCGGTGCGGTCCGTGTTCGGCCCCACCAACCAGGAGGTGG GGGCACCATCCTGGATGTCGGGCGCGTTCCAGGTGGGCCAGCTCTCCATCACCTATAACCGCCTGTGGATCATCGTCTTC GCCCTGCTGGTGTTCTTCGCTCTGCTGCTGGTGCTGAAGCGCACGCCCCTCGGCCTCTATGTGCGCGCGGTGACGCAGAA CCGGCGCATGGCGGCGGCCATGGGCATCCGCACCGGGCGCATCGACGCGCTCACCTTCGGCCTCGGCTCCGGCATCGCCG GCATCGCGGGCGTGGCGCTCTCGCAGATCGACAATGTGAGCCCCAACCTCGGGCAGGGCTACATCATCGACAGCTTCATG GTGGTGGTGTTCGGCGGGGTCGGGAACCTCTGGGGCACGCTGGTGGGCGCCTTCACGCTGGGTATCGCCAACAAGCTGCT GGAGCCCTTCGCCGGCGCGGTGCTGGGCAAGATCCTGCTGCTCGTCTTCATCATCCTGTTCATCCAGAAGCGCCCGCGCG GCCTGTTCGCGCTCAAGGGCCGGGCGGTGGAATCGTGA
Upstream 100 bases:
>100_bases AGGGGCGCTCCTCCCTCTCCCCGGCAACGGGGAGGGGGAGCCTCGCTCTTCCCGTCGCGAGCTGCCGGCACCGCCCGGCT GCGCTGGAGCGGATACCTTC
Downstream 100 bases:
>100_bases AACAGTCCGGCATCATCGACCGCACCGGCGGCATCTTCCTTCTCGTCATGCTGGCGGTGGCGGTGCTGGTGCCCGCCTCC AACCTGCTGCTCCCGGCCGG
Product: inner-membrane translocator
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 545; Mature: 545
Protein sequence:
>545_residues MMRPPVPPALARILALPLLALLLAVLLPACAVRAQAQADISAIVAKFANDSYSDTTDALVELSATGSAQAAAVVEALGAG RLMFDPATKAVYIRTPAGMADAATGTIVANAPTNLSVVRANNRVRRAIDAASGALSLLNPDPVRRAEAAAAVFKSRDAAA LATVEAAIAKETVGSVKDALEQARAAILVGKSEVPEAVRLLAIQKITARGDQEAISLLRSLPADAPASLKAAAEAGIAKV EQNLKFWAVAQNVWYGLSLGSVLLLAAIGLAITFGVMGVINMAHGEMVMLGAYTTFVVQDFIRHSAPGLFDWSLAIALPL AFLFTGLVGILIERTVIRFLYGRPLETLLATWGVSLILQQAVRSVFGPTNQEVGAPSWMSGAFQVGQLSITYNRLWIIVF ALLVFFALLLVLKRTPLGLYVRAVTQNRRMAAAMGIRTGRIDALTFGLGSGIAGIAGVALSQIDNVSPNLGQGYIIDSFM VVVFGGVGNLWGTLVGAFTLGIANKLLEPFAGAVLGKILLLVFIILFIQKRPRGLFALKGRAVES
Sequences:
>Translated_545_residues MMRPPVPPALARILALPLLALLLAVLLPACAVRAQAQADISAIVAKFANDSYSDTTDALVELSATGSAQAAAVVEALGAG RLMFDPATKAVYIRTPAGMADAATGTIVANAPTNLSVVRANNRVRRAIDAASGALSLLNPDPVRRAEAAAAVFKSRDAAA LATVEAAIAKETVGSVKDALEQARAAILVGKSEVPEAVRLLAIQKITARGDQEAISLLRSLPADAPASLKAAAEAGIAKV EQNLKFWAVAQNVWYGLSLGSVLLLAAIGLAITFGVMGVINMAHGEMVMLGAYTTFVVQDFIRHSAPGLFDWSLAIALPL AFLFTGLVGILIERTVIRFLYGRPLETLLATWGVSLILQQAVRSVFGPTNQEVGAPSWMSGAFQVGQLSITYNRLWIIVF ALLVFFALLLVLKRTPLGLYVRAVTQNRRMAAAMGIRTGRIDALTFGLGSGIAGIAGVALSQIDNVSPNLGQGYIIDSFM VVVFGGVGNLWGTLVGAFTLGIANKLLEPFAGAVLGKILLLVFIILFIQKRPRGLFALKGRAVES >Mature_545_residues MMRPPVPPALARILALPLLALLLAVLLPACAVRAQAQADISAIVAKFANDSYSDTTDALVELSATGSAQAAAVVEALGAG RLMFDPATKAVYIRTPAGMADAATGTIVANAPTNLSVVRANNRVRRAIDAASGALSLLNPDPVRRAEAAAAVFKSRDAAA LATVEAAIAKETVGSVKDALEQARAAILVGKSEVPEAVRLLAIQKITARGDQEAISLLRSLPADAPASLKAAAEAGIAKV EQNLKFWAVAQNVWYGLSLGSVLLLAAIGLAITFGVMGVINMAHGEMVMLGAYTTFVVQDFIRHSAPGLFDWSLAIALPL AFLFTGLVGILIERTVIRFLYGRPLETLLATWGVSLILQQAVRSVFGPTNQEVGAPSWMSGAFQVGQLSITYNRLWIIVF ALLVFFALLLVLKRTPLGLYVRAVTQNRRMAAAMGIRTGRIDALTFGLGSGIAGIAGVALSQIDNVSPNLGQGYIIDSFM VVVFGGVGNLWGTLVGAFTLGIANKLLEPFAGAVLGKILLLVFIILFIQKRPRGLFALKGRAVES
Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG0559
COG function: function code E; Branched-chain amino acid ABC-type transport system, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789866, Length=305, Percent_Identity=31.4754098360656, Blast_Score=97, Evalue=4e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 57198; Mature: 57198
Theoretical pI: Translated: 10.42; Mature: 10.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRPPVPPALARILALPLLALLLAVLLPACAVRAQAQADISAIVAKFANDSYSDTTDALV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHE ELSATGSAQAAAVVEALGAGRLMFDPATKAVYIRTPAGMADAATGTIVANAPTNLSVVRA EECCCCCHHHHHHHHHHCCCCEEECCCCCEEEEECCCCCCCCCCCCEEECCCCCEEEEEC NNRVRRAIDAASGALSLLNPDPVRRAEAAAAVFKSRDAAALATVEAAIAKETVGSVKDAL CHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH EQARAAILVGKSEVPEAVRLLAIQKITARGDQEAISLLRSLPADAPASLKAAAEAGIAKV HHHHHEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHH EQNLKFWAVAQNVWYGLSLGSVLLLAAIGLAITFGVMGVINMAHGEMVMLGAYTTFVVQD HHCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHH FIRHSAPGLFDWSLAIALPLAFLFTGLVGILIERTVIRFLYGRPLETLLATWGVSLILQQ HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH AVRSVFGPTNQEVGAPSWMSGAFQVGQLSITYNRLWIIVFALLVFFALLLVLKRTPLGLY HHHHHCCCCCCCCCCCCHHCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHE VRAVTQNRRMAAAMGIRTGRIDALTFGLGSGIAGIAGVALSQIDNVSPNLGQGYIIDSFM EEEHHCCCHHHHHHCCCCCCHHEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHH VVVFGGVGNLWGTLVGAFTLGIANKLLEPFAGAVLGKILLLVFIILFIQKRPRGLFALKG HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC RAVES CCCCC >Mature Secondary Structure MMRPPVPPALARILALPLLALLLAVLLPACAVRAQAQADISAIVAKFANDSYSDTTDALV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHE ELSATGSAQAAAVVEALGAGRLMFDPATKAVYIRTPAGMADAATGTIVANAPTNLSVVRA EECCCCCHHHHHHHHHHCCCCEEECCCCCEEEEECCCCCCCCCCCCEEECCCCCEEEEEC NNRVRRAIDAASGALSLLNPDPVRRAEAAAAVFKSRDAAALATVEAAIAKETVGSVKDAL CHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH EQARAAILVGKSEVPEAVRLLAIQKITARGDQEAISLLRSLPADAPASLKAAAEAGIAKV HHHHHEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHH EQNLKFWAVAQNVWYGLSLGSVLLLAAIGLAITFGVMGVINMAHGEMVMLGAYTTFVVQD HHCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHH FIRHSAPGLFDWSLAIALPLAFLFTGLVGILIERTVIRFLYGRPLETLLATWGVSLILQQ HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH AVRSVFGPTNQEVGAPSWMSGAFQVGQLSITYNRLWIIVFALLVFFALLLVLKRTPLGLY HHHHHCCCCCCCCCCCCHHCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHE VRAVTQNRRMAAAMGIRTGRIDALTFGLGSGIAGIAGVALSQIDNVSPNLGQGYIIDSFM EEEHHCCCHHHHHHCCCCCCHHEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHH VVVFGGVGNLWGTLVGAFTLGIANKLLEPFAGAVLGKILLLVFIILFIQKRPRGLFALKG HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC RAVES CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2120183; 10984043; 2509433 [H]