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The map label for this gene is 154247940

Identifier: 154247940

GI number: 154247940

Start: 4446233

End: 4446451

Strand: Direct

Name: 154247940

Synonym: Xaut_4019

Alternate gene names: NA

Gene position: 4446233-4446451 (Clockwise)

Preceding gene: 154247926

Following gene: 154247948

Centisome position: 83.75

GC content: 65.3

Gene sequence:

>219_bases
ATGGATATGCGCAAGCTGGTCGGCCGGAATTTCGCTCGCCTGCGTCAGGAGAAAGGCCTGACGCAGGAGGATGTCGAGGC
GCGCTCCGGTTTCAGCCAGCAGTATATCAGCGGCCTCGAGCGTGGCCGCCGAAACCCCACCGTCATCACCCTGTACGAGC
TGGCCCAGGCCTTGGGCGTCAGCCACGAGGAGCTGGTGCGTGCGGACGGCAGGGACTGA

Upstream 100 bases:

>100_bases
CGATCGGCATCGGCATTGCCGCCGTCTAACCCGCTAGGGCCGCTTGATTACATATTATAGTTGATAAGCTCAAAGTGTGT
AAATTGCGATCCGTCTGCGC

Downstream 100 bases:

>100_bases
ACCGCGGGGAATGCCCCGGCCGGAGCCGGCCGGGGCCTTGGGCGGCTCACTCGCCACGGCGCCCGCTGGGGCGGGACCAG
ATGAGGCTGAAGGTGTCAGC

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 72

Protein sequence:

>72_residues
MDMRKLVGRNFARLRQEKGLTQEDVEARSGFSQQYISGLERGRRNPTVITLYELAQALGVSHEELVRADGRD

Sequences:

>Translated_72_residues
MDMRKLVGRNFARLRQEKGLTQEDVEARSGFSQQYISGLERGRRNPTVITLYELAQALGVSHEELVRADGRD
>Mature_72_residues
MDMRKLVGRNFARLRQEKGLTQEDVEARSGFSQQYISGLERGRRNPTVITLYELAQALGVSHEELVRADGRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 8220; Mature: 8220

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMRKLVGRNFARLRQEKGLTQEDVEARSGFSQQYISGLERGRRNPTVITLYELAQALGV
CCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCEEEHHHHHHHHCC
SHEELVRADGRD
CHHHHHHCCCCC
>Mature Secondary Structure
MDMRKLVGRNFARLRQEKGLTQEDVEARSGFSQQYISGLERGRRNPTVITLYELAQALGV
CCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCEEEHHHHHHHHCC
SHEELVRADGRD
CHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]