| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is kinA [H]
Identifier: 154247870
GI number: 154247870
Start: 4367584
End: 4369035
Strand: Direct
Name: kinA [H]
Synonym: Xaut_3947
Alternate gene names: 154247870
Gene position: 4367584-4369035 (Clockwise)
Preceding gene: 154247869
Following gene: 154247871
Centisome position: 82.27
GC content: 67.84
Gene sequence:
>1452_bases ATGATCACGCGCCTCGACCCTCGCCAGTGGCCCGTCACCCTCAAGGTGCCTTTGGCGGTTGCGGCGCTCATGGTGCTGGT TGGGCTTGCCCTGTCCGAGCGCGTGCTGAGCCGGCTGGGGGAGACGCAGGAGCGCCAGTTGCGCGCTTTGGCGCAAACCT ATCTGGACAGCCTCTCCTCCGCGGTCGCGCCCGCGATCCTGAGAGACGATGTCTGGGAAGTCTATGACGCCGTCATGCGG GCACAAGATCTCAACAAGAGCCTGCATCCATTGAGCGCCGTGATCACCGACGCGGAAGGCCTCATCATCGCGGCGTCCGA TCCCCGCCGCTTCCCCGTTGGGGCGCGTCTCCCGTCGGATCTTGCTTCGCTCGGTGCCGGCCGGGATTTCAGCTTCGAGG CTGGCGCCAGATCCGCCACCGCGACGCGCGTGCTTTCCTATCCTGGACGTATCGTCGGAATCATCCACGCCACTTTCGAC ACCAGCCATCTGGCTTTGGAGCGGCGCGACGTCGTCATCGCGCTCGCGGCCACGAACGGGATGGTCACGCTGCTGCTCGC CGTGGCCGGCTGGTTGCTCGTCGCCCGCATGATGGCGCCGGTGCGCACGCTCTCGCGCTATCTGGGCGCTGCGAGCGAAG GGCGGGCGACGCCCGTTCCCCCGGAGGCGGTCGCGCGCAACGGCGCTGAATTCGCCCGCCTGTTCCTAGCCTACAATGCG CTGGTCCGGTCCATGTACGAGCGGGAGGACCTAGCCCGACAATTGGCGGACGAGCATCGGCTCGGCAGCCTCGGGCGGCT CACCTCGGCGCTCGCCCACGAGATCAACAACCCGCTGGGCGGCCTTTTCAACGCGCTGGCGACGCTGAAGACCCATGGAC ACCATGCGGCGGTCCGAAAATCGTCCCTCGGCCTTCTCGAACGAGGCCTCGTCGGTATCCGCGACGTGGTGCGCACCACC CTCGCTTTGTATCGGCCGGAGCAGGCGCCGCGACCCCTCGCCATGGCCGATTTCGAGGACCTGCAGCTACTGATTGCCCC CGCGGCGCGCCGGAAGGGTGTCGATCTGAGGTTCTCCGGTCCCGTCGACGTGTTGCTTCCTCTGCCCAGCACCCCGGTGC GCCAGGCCGTGCTGAACCTGCTGCTGAATGCGGTTTCCGCCGCCCCGCCGGGAAGCGAAGTGGCGGTGGATGCGTCGCTC ACGCCGACGGCCCTGCATGTAATCGTGTCGGATCGAGGCAGCGGCCTGCCCGAGCCTGCGGGGTGCCTTCTTGCGGCTGG CGGGGAAACGGGTGGCCCACTCTGGGGCGGCGGCCTCGGCTTGTGGACCACCCGGCGCATCCTGGACGACCTCGGTGCCT CGGCCGAGGTCGAGCGGCCTGAAACGGGGGGAACGCGGATCCGTCTTCTCTTCCCTTTCATCGCCCCAATGGAGCTCGCC CATGTCGCATGA
Upstream 100 bases:
>100_bases TCGCCATGCTGCGGCTCGACGGGTTTGTGCAGCGGGAGGCGAGCCTCTTCGATCCAATTGCCGCAAAGGCGGCGCTCGTT GCGGGCACCGGGTGACGCCC
Downstream 100 bases:
>100_bases GCCTCCCGTCATCGGCCTCGTGGAGGACGATCCCATCATGGGCGAGAGCCTCGCGCAGCGGCTCGGCCTGGAGGGAATGA GGGTGCATTGGTGGCGGACC
Product: integral membrane sensor signal transduction histidine kinase
Products: NA
Alternate protein names: Stage II sporulation protein F; Stage II sporulation protein J [H]
Number of amino acids: Translated: 483; Mature: 483
Protein sequence:
>483_residues MITRLDPRQWPVTLKVPLAVAALMVLVGLALSERVLSRLGETQERQLRALAQTYLDSLSSAVAPAILRDDVWEVYDAVMR AQDLNKSLHPLSAVITDAEGLIIAASDPRRFPVGARLPSDLASLGAGRDFSFEAGARSATATRVLSYPGRIVGIIHATFD TSHLALERRDVVIALAATNGMVTLLLAVAGWLLVARMMAPVRTLSRYLGAASEGRATPVPPEAVARNGAEFARLFLAYNA LVRSMYEREDLARQLADEHRLGSLGRLTSALAHEINNPLGGLFNALATLKTHGHHAAVRKSSLGLLERGLVGIRDVVRTT LALYRPEQAPRPLAMADFEDLQLLIAPAARRKGVDLRFSGPVDVLLPLPSTPVRQAVLNLLLNAVSAAPPGSEVAVDASL TPTALHVIVSDRGSGLPEPAGCLLAAGGETGGPLWGGGLGLWTTRRILDDLGASAEVERPETGGTRIRLLFPFIAPMELA HVA
Sequences:
>Translated_483_residues MITRLDPRQWPVTLKVPLAVAALMVLVGLALSERVLSRLGETQERQLRALAQTYLDSLSSAVAPAILRDDVWEVYDAVMR AQDLNKSLHPLSAVITDAEGLIIAASDPRRFPVGARLPSDLASLGAGRDFSFEAGARSATATRVLSYPGRIVGIIHATFD TSHLALERRDVVIALAATNGMVTLLLAVAGWLLVARMMAPVRTLSRYLGAASEGRATPVPPEAVARNGAEFARLFLAYNA LVRSMYEREDLARQLADEHRLGSLGRLTSALAHEINNPLGGLFNALATLKTHGHHAAVRKSSLGLLERGLVGIRDVVRTT LALYRPEQAPRPLAMADFEDLQLLIAPAARRKGVDLRFSGPVDVLLPLPSTPVRQAVLNLLLNAVSAAPPGSEVAVDASL TPTALHVIVSDRGSGLPEPAGCLLAAGGETGGPLWGGGLGLWTTRRILDDLGASAEVERPETGGTRIRLLFPFIAPMELA HVA >Mature_483_residues MITRLDPRQWPVTLKVPLAVAALMVLVGLALSERVLSRLGETQERQLRALAQTYLDSLSSAVAPAILRDDVWEVYDAVMR AQDLNKSLHPLSAVITDAEGLIIAASDPRRFPVGARLPSDLASLGAGRDFSFEAGARSATATRVLSYPGRIVGIIHATFD TSHLALERRDVVIALAATNGMVTLLLAVAGWLLVARMMAPVRTLSRYLGAASEGRATPVPPEAVARNGAEFARLFLAYNA LVRSMYEREDLARQLADEHRLGSLGRLTSALAHEINNPLGGLFNALATLKTHGHHAAVRKSSLGLLERGLVGIRDVVRTT LALYRPEQAPRPLAMADFEDLQLLIAPAARRKGVDLRFSGPVDVLLPLPSTPVRQAVLNLLLNAVSAAPPGSEVAVDASL TPTALHVIVSDRGSGLPEPAGCLLAAGGETGGPLWGGGLGLWTTRRILDDLGASAEVERPETGGTRIRLLFPFIAPMELA HVA
Specific function: Phosphorylates the sporulation-regulatory proteins spo0A and spo0F. It also autophosphorylates in the presence of ATP [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 3 PAS (PER-ARNT-SIM) domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR013655 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF08447 PAS_3 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 51447; Mature: 51447
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITRLDPRQWPVTLKVPLAVAALMVLVGLALSERVLSRLGETQERQLRALAQTYLDSLSS CCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH AVAPAILRDDVWEVYDAVMRAQDLNKSLHPLSAVITDAEGLIIAASDPRRFPVGARLPSD HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHH LASLGAGRDFSFEAGARSATATRVLSYPGRIVGIIHATFDTSHLALERRDVVIALAATNG HHHHCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEEEECCCHHHEEECCCEEEEEEECCC MVTLLLAVAGWLLVARMMAPVRTLSRYLGAASEGRATPVPPEAVARNGAEFARLFLAYNA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHH LVRSMYEREDLARQLADEHRLGSLGRLTSALAHEINNPLGGLFNALATLKTHGHHAAVRK HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHH SSLGLLERGLVGIRDVVRTTLALYRPEQAPRPLAMADFEDLQLLIAPAARRKGVDLRFSG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHEECHHHHCCCCEEECC PVDVLLPLPSTPVRQAVLNLLLNAVSAAPPGSEVAVDASLTPTALHVIVSDRGSGLPEPA CCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEEEECCCCCCCCCC GCLLAAGGETGGPLWGGGLGLWTTRRILDDLGASAEVERPETGGTRIRLLFPFIAPMELA CEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHHHHHHHHH HVA HCC >Mature Secondary Structure MITRLDPRQWPVTLKVPLAVAALMVLVGLALSERVLSRLGETQERQLRALAQTYLDSLSS CCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH AVAPAILRDDVWEVYDAVMRAQDLNKSLHPLSAVITDAEGLIIAASDPRRFPVGARLPSD HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHH LASLGAGRDFSFEAGARSATATRVLSYPGRIVGIIHATFDTSHLALERRDVVIALAATNG HHHHCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEEEECCCHHHEEECCCEEEEEEECCC MVTLLLAVAGWLLVARMMAPVRTLSRYLGAASEGRATPVPPEAVARNGAEFARLFLAYNA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHH LVRSMYEREDLARQLADEHRLGSLGRLTSALAHEINNPLGGLFNALATLKTHGHHAAVRK HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHH SSLGLLERGLVGIRDVVRTTLALYRPEQAPRPLAMADFEDLQLLIAPAARRKGVDLRFSG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHEECHHHHCCCCEEECC PVDVLLPLPSTPVRQAVLNLLLNAVSAAPPGSEVAVDASLTPTALHVIVSDRGSGLPEPA CCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEEEECCCCCCCCCC GCLLAAGGETGGPLWGGGLGLWTTRRILDDLGASAEVERPETGGTRIRLLFPFIAPMELA CEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHHHHHHHHH HVA HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2104615; 2509430; 9384377 [H]