Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154247865
Identifier: 154247865
GI number: 154247865
Start: 4364293
End: 4365357
Strand: Direct
Name: 154247865
Synonym: Xaut_3942
Alternate gene names: NA
Gene position: 4364293-4365357 (Clockwise)
Preceding gene: 154247864
Following gene: 154247866
Centisome position: 82.21
GC content: 67.14
Gene sequence:
>1065_bases ATGAGCGCCGACCTGTCATTGACCGGGCGCAAGCCGCAGCGGGAGGCATCGCCTCTGGCCTGGGCGGCGGCGACCGTCGC GGCGATCGCGCTCTGGTTCGTGGTCTATGCCCAGCTCGCACCGTTCTCCCGGTGGCTGGTGGCCCGCCTGCCGGTGGAGC CGGGCAGCCATCTTGCCGAAGCCGTGGCGTTCTTCATCTACGACATGCCCAAGGTGCTGATGCTGCTGACACTGGTGGTG TTCGTCATGGGCGTGGTGCGCAGCTTCTTCTCCGCCGAGCGCACGCGTGCGTTGCTCGCCGGAAATCGCGAAGGGCTCGG CAATATCGCTGCGGCCGGCCTCGGTATCGTCACGCCTTTCTGCTCCTGCTCGGCGGTGCCCCTGTTCGTCGGCTTCGTCT CCGCCGGGGTCCCCCTCGGCGTGACGTTTTCCTTCCTCATCGCCGCGCCCATGGTGAACGAGGTGGCGCTGGGCCTTCTG TTCGCGCTCGTGGGCTGGAAGGTGGCGCTCACCTATCTGGCCTTCGGCCTCGGGGTGGCCATCGTCGCCGGCTGGGTCAT CGGGCGGCTGCATCTGGAGGGCTGGCTGGAAGACTGGGTGCGCAACGTGCGCGCCGCTCCGGTCGAGCTGCCGCCCAATG GCATGACGCTGGTGGACCGCATCAAGGCCGGCCTCGACGCGGTACGCGACATTGTCGGCAAGGTCTGGATGTGGATCATC GCCGGCATCGCAGCGGGCGCCTTCATCCACGGCTACGTGCCGGCGGACCTCCTCGCCTCCATCATGGGACGGGATGCGTG GTGGTCGGTTCCGACCGCGGTTCTGCTGGGCATTCCCATGTATTCCAATGCCGCGGGCATCATCCCGGTGGTGGAGGCCC TGCTGGCCAAGGGCGCTGCGCTGGGCACCGTGCTCGCCTTCATGATGGCGGTGATCGCCTTGTCCCTGCCGGAGATGATC ATCCTGCGCAAAGTCCTGAGCCCGAAGCTGATCGCCGTGTTCGTGGGCGTGGTCGGCACCGGCATCCTCGCCGTGGGGTT CCTGTTCAATGCGCTGTTTTCTTGA
Upstream 100 bases:
>100_bases GGGTGCGCTACCGTCGCAATCCCGAACTGCCGGCCGAGCAGGCAACCATCATCAATGCTGTCCTCACCACCCTGGACGCT TCATCGAACAGGAGAGCCGC
Downstream 100 bases:
>100_bases AGCCGGAAAGGCTGGAGTCATGAAAGACGTGAAAGTGCTCGGTCCGGGCTGCTCCCGCTGTGAGGCAACGGCGCAGATGG TGCGGGATGAGGCGGCCAAG
Product: permease
Products: NA
Alternate protein names: Permease Family Protein; Permease-Like Protein; Permease Superfamily; Integral Membrane Protein
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MSADLSLTGRKPQREASPLAWAAATVAAIALWFVVYAQLAPFSRWLVARLPVEPGSHLAEAVAFFIYDMPKVLMLLTLVV FVMGVVRSFFSAERTRALLAGNREGLGNIAAAGLGIVTPFCSCSAVPLFVGFVSAGVPLGVTFSFLIAAPMVNEVALGLL FALVGWKVALTYLAFGLGVAIVAGWVIGRLHLEGWLEDWVRNVRAAPVELPPNGMTLVDRIKAGLDAVRDIVGKVWMWII AGIAAGAFIHGYVPADLLASIMGRDAWWSVPTAVLLGIPMYSNAAGIIPVVEALLAKGAALGTVLAFMMAVIALSLPEMI ILRKVLSPKLIAVFVGVVGTGILAVGFLFNALFS
Sequences:
>Translated_354_residues MSADLSLTGRKPQREASPLAWAAATVAAIALWFVVYAQLAPFSRWLVARLPVEPGSHLAEAVAFFIYDMPKVLMLLTLVV FVMGVVRSFFSAERTRALLAGNREGLGNIAAAGLGIVTPFCSCSAVPLFVGFVSAGVPLGVTFSFLIAAPMVNEVALGLL FALVGWKVALTYLAFGLGVAIVAGWVIGRLHLEGWLEDWVRNVRAAPVELPPNGMTLVDRIKAGLDAVRDIVGKVWMWII AGIAAGAFIHGYVPADLLASIMGRDAWWSVPTAVLLGIPMYSNAAGIIPVVEALLAKGAALGTVLAFMMAVIALSLPEMI ILRKVLSPKLIAVFVGVVGTGILAVGFLFNALFS >Mature_353_residues SADLSLTGRKPQREASPLAWAAATVAAIALWFVVYAQLAPFSRWLVARLPVEPGSHLAEAVAFFIYDMPKVLMLLTLVVF VMGVVRSFFSAERTRALLAGNREGLGNIAAAGLGIVTPFCSCSAVPLFVGFVSAGVPLGVTFSFLIAAPMVNEVALGLLF ALVGWKVALTYLAFGLGVAIVAGWVIGRLHLEGWLEDWVRNVRAAPVELPPNGMTLVDRIKAGLDAVRDIVGKVWMWIIA GIAAGAFIHGYVPADLLASIMGRDAWWSVPTAVLLGIPMYSNAAGIIPVVEALLAKGAALGTVLAFMMAVIALSLPEMII LRKVLSPKLIAVFVGVVGTGILAVGFLFNALFS
Specific function: Unknown
COG id: COG0701
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37394; Mature: 37263
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSADLSLTGRKPQREASPLAWAAATVAAIALWFVVYAQLAPFSRWLVARLPVEPGSHLAE CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH AVAFFIYDMPKVLMLLTLVVFVMGVVRSFFSAERTRALLAGNREGLGNIAAAGLGIVTPF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH CSCSAVPLFVGFVSAGVPLGVTFSFLIAAPMVNEVALGLLFALVGWKVALTYLAFGLGVA HCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVAGWVIGRLHLEGWLEDWVRNVRAAPVELPPNGMTLVDRIKAGLDAVRDIVGKVWMWII HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AGIAAGAFIHGYVPADLLASIMGRDAWWSVPTAVLLGIPMYSNAAGIIPVVEALLAKGAA HHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHH LGTVLAFMMAVIALSLPEMIILRKVLSPKLIAVFVGVVGTGILAVGFLFNALFS HHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SADLSLTGRKPQREASPLAWAAATVAAIALWFVVYAQLAPFSRWLVARLPVEPGSHLAE CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH AVAFFIYDMPKVLMLLTLVVFVMGVVRSFFSAERTRALLAGNREGLGNIAAAGLGIVTPF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH CSCSAVPLFVGFVSAGVPLGVTFSFLIAAPMVNEVALGLLFALVGWKVALTYLAFGLGVA HCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVAGWVIGRLHLEGWLEDWVRNVRAAPVELPPNGMTLVDRIKAGLDAVRDIVGKVWMWII HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AGIAAGAFIHGYVPADLLASIMGRDAWWSVPTAVLLGIPMYSNAAGIIPVVEALLAKGAA HHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHH LGTVLAFMMAVIALSLPEMIILRKVLSPKLIAVFVGVVGTGILAVGFLFNALFS HHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA