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The map label for this gene is yqeB [H]

Identifier: 154247833

GI number: 154247833

Start: 4327322

End: 4328026

Strand: Direct

Name: yqeB [H]

Synonym: Xaut_3910

Alternate gene names: 154247833

Gene position: 4327322-4328026 (Clockwise)

Preceding gene: 154247832

Following gene: 154247834

Centisome position: 81.51

GC content: 72.2

Gene sequence:

>705_bases
ATGCGCCTCGACCTTCTGGCGGCCCTCAATGCGGAGCGCCTCGCGCGGCGGGCCTGCGTGATGGTGACGGAGCTGGAGAG
CGGCGCCCAGCGTCTGGTCGGGCTCGATCAGGTGGACGCCGATCCGCTCGCCGGCGCCATCCGCGAAGCGCTCGCCCTCC
GCCGCAGCCGCCTCGTGGGGGAGGGAGCAAAGCGGGCCTTCATCGCCGTGGAGGTGCCGCCCCCGCGCATGCTGGTGATC
GGCGCGGTGCATATCTCCCAGGCATTGGCGCCCATGGCGCGCCTCGCCGGCTTTGACCTGACCATCATCGACCCGCGCAC
CGCCTTCGCCACGCCCGAACGGTTCGGCGACGTGCCGGTGATCGCGGAATGGCCGGACGTGGCCTTGCCGGCCTATGGCC
TCGACCCCTTCACTGCCCTGGTCGCCTTGACCCATGACCCCAAGGTGGACGAGCCGGCCCTTATCGCCGCGCTGAAGGCG
GGCTGCTTTTACGTGGGCGCGCTCGGCTCGCGCCGCACCCATGCCCGGCGGGTGGAGCGGCTTCAGGCGGTGGGATTGTC
GCCGGAGGTCATCGGCCGCATACATGCGCCCATCGGCATCGACATCGGCGCCGCCAGCCCCGCCGAGATCGCGGTGGCGG
TGCTGGCCGAGGTGATCCGCGCCCTGCGCTCCGGCGTGGCCCACGCGGAAGGAGTTGCGGCGTGA

Upstream 100 bases:

>100_bases
GAGAAGGTCGCCGGTGACGCGGCGCGTCCGGCGTTATATTCATTGGGGAAGATGACGCAGCCGGCCCGGCCGGCCGCTCC
CTCAGGGAGGATGCCCACCC

Downstream 100 bases:

>100_bases
AGTTCGGCTCCCTGCCCCTGTCCGAGGCCGAGGGCGCCATCGCCGCCCATTCGGTGCGGCTCGACGACGGCGTCCTCAAG
AAGGGTACGCGGCTCGGCCC

Product: xanthine dehydrogenase accessory factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MRLDLLAALNAERLARRACVMVTELESGAQRLVGLDQVDADPLAGAIREALALRRSRLVGEGAKRAFIAVEVPPPRMLVI
GAVHISQALAPMARLAGFDLTIIDPRTAFATPERFGDVPVIAEWPDVALPAYGLDPFTALVALTHDPKVDEPALIAALKA
GCFYVGALGSRRTHARRVERLQAVGLSPEVIGRIHAPIGIDIGAASPAEIAVAVLAEVIRALRSGVAHAEGVAA

Sequences:

>Translated_234_residues
MRLDLLAALNAERLARRACVMVTELESGAQRLVGLDQVDADPLAGAIREALALRRSRLVGEGAKRAFIAVEVPPPRMLVI
GAVHISQALAPMARLAGFDLTIIDPRTAFATPERFGDVPVIAEWPDVALPAYGLDPFTALVALTHDPKVDEPALIAALKA
GCFYVGALGSRRTHARRVERLQAVGLSPEVIGRIHAPIGIDIGAASPAEIAVAVLAEVIRALRSGVAHAEGVAA
>Mature_234_residues
MRLDLLAALNAERLARRACVMVTELESGAQRLVGLDQVDADPLAGAIREALALRRSRLVGEGAKRAFIAVEVPPPRMLVI
GAVHISQALAPMARLAGFDLTIIDPRTAFATPERFGDVPVIAEWPDVALPAYGLDPFTALVALTHDPKVDEPALIAALKA
GCFYVGALGSRRTHARRVERLQAVGLSPEVIGRIHAPIGIDIGAASPAEIAVAVLAEVIRALRSGVAHAEGVAA

Specific function: Unknown

COG id: COG1975

COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789240, Length=161, Percent_Identity=34.7826086956522, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI1786477, Length=85, Percent_Identity=44.7058823529412, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR017695
- InterPro:   IPR003777 [H]

Pfam domain/function: PF02625 XdhC_CoxI [H]

EC number: NA

Molecular weight: Translated: 24596; Mature: 24596

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLDLLAALNAERLARRACVMVTELESGAQRLVGLDQVDADPLAGAIREALALRRSRLVG
CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHC
EGAKRAFIAVEVPPPRMLVIGAVHISQALAPMARLAGFDLTIIDPRTAFATPERFGDVPV
CCCCEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHCCCCE
IAEWPDVALPAYGLDPFTALVALTHDPKVDEPALIAALKAGCFYVGALGSRRTHARRVER
EECCCCCCCCCCCCCHHHHHEEECCCCCCCCHHHHHHHHHHHHEEECCCCCHHHHHHHHH
LQAVGLSPEVIGRIHAPIGIDIGAASPAEIAVAVLAEVIRALRSGVAHAEGVAA
HHHCCCCHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MRLDLLAALNAERLARRACVMVTELESGAQRLVGLDQVDADPLAGAIREALALRRSRLVG
CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHC
EGAKRAFIAVEVPPPRMLVIGAVHISQALAPMARLAGFDLTIIDPRTAFATPERFGDVPV
CCCCEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHCCCCE
IAEWPDVALPAYGLDPFTALVALTHDPKVDEPALIAALKAGCFYVGALGSRRTHARRVER
EECCCCCCCCCCCCCHHHHHEEECCCCCCCCHHHHHHHHHHHHEEECCCCCHHHHHHHHH
LQAVGLSPEVIGRIHAPIGIDIGAASPAEIAVAVLAEVIRALRSGVAHAEGVAA
HHHCCCCHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]